RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 PRR5LQ6MZQ0 368 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 ANO5Q75V66 913 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 PASD1Q8IV76 773 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 PPIL6Q8IXY8 311 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 BBS5Q8N3I7 341 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 NAT8LQ8N9F0 302 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 TTC13Q8NBP0 860 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 POMGNT1Q8WZA1 660 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 IQCGQ9H095 443 aaKnown RBP12.29□□□□□ -0.44
VTI1A-205ENST00000483122 RAB20Q9NX57 234 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 SAE1Q9UBE0 346 aaPredicted RBP12.29□□□□□ -0.44
VTI1A-205ENST00000483122 CDH22Q9UJ99 828 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 ARHGAP10A1A4S6 786 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 MAMLD1Q13495 774 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 APOFQ13790 326 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 SLC10A5Q5PT55 438 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 ATG16L1Q676U5 607 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 TXNRD3NBQ6F5E7 133 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 ZCCHC23Q6ZST2 131 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 CRLF3Q8IUI8 442 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 JADE3Q92613 823 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 ZNF696Q9H7X3 374 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 TMOD2Q9NZR1 351 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 SSX2IPQ9Y2D8 614 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 AP4B1Q9Y6B7 739 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 ANKRD31Q8N7Z5 1873 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 IGLV3-22A0A075B6J6 115 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 A0A0B4J269 797 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 TRIM49D1C9J1S8 452 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 E7ESA3 106 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 TLR3O15455 904 aaKnown RBP12.28□□□□□ -0.44
VTI1A-205ENST00000483122 INHBAP08476 426 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 POLR2MP0CAP2 368 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 CDH2P19022 906 aaPredicted RBP12.28□□□□□ -0.44
VTI1A-205ENST00000483122 STT3AP46977 705 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 GPC3P51654 580 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 MRPS5P82675 430 aaKnown RBP12.28□□□□□ -0.44
VTI1A-205ENST00000483122 GSTM4Q03013 218 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 TUBB3Q13509 450 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 KRT39Q6A163 491 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 SPOCD1Q6ZMY3 1216 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 Q6ZNX1 250 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 AMIGO2Q86SJ2 522 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 RCOR2Q8IZ40 523 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 SLC44A1Q8WWI5 657 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 SPON1Q9HCB6 807 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 TBCCD1Q9NVR7 557 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 PLK2Q9NYY3 685 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 PLLPQ9Y342 182 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 IKBKGQ9Y6K9 419 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 MYH9P35579 1960 aaKnown RBP12.28□□□□□ -0.44
VTI1A-205ENST00000483122 TCRBV9S1A1TA0A576 114 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 TRIM43BA6NCK2 446 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 TNFAIP8O95379 198 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 ITGAVP06756 1048 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 SRGAP2CP0DJJ0 459 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 SRGAP2BP0DMP2 458 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 CCR3P51677 355 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 OXCT1P55809 520 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 CNGA3Q16281 694 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 FAM182AQ5T1J6 154 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 KBTBD6Q86V97 674 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 NUDCD3Q8IVD9 361 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 ALDH16A1Q8IZ83 802 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 RTKN2Q8IZC4 609 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 DEFB107AQ8IZN7 70 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 AHI1Q8N157 1196 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 ACCSQ96QU6 501 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 NACC1Q96RE7 527 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 MMP19Q99542 508 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 APOL6Q9BWW8 343 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 SLC13A1Q9BZW2 595 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 MAF1Q9H063 256 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 SIRPGQ9P1W8 387 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 ZNF180Q9UJW8 692 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 PACSIN3Q9UKS6 424 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 FAF1Q9UNN5 650 aaPredicted RBP12.28□□□□□ -0.44
VTI1A-205ENST00000483122 IVNS1ABPQ9Y6Y0 642 aa12.28□□□□□ -0.44
VTI1A-205ENST00000483122 ARHGEF35A5YM69 484 aa12.27□□□□□ -0.44
VTI1A-205ENST00000483122 IPO5O00410 1097 aaKnown RBP12.27□□□□□ -0.44
VTI1A-205ENST00000483122 PMM2O15305 246 aa12.27□□□□□ -0.44
VTI1A-205ENST00000483122 ADCY3O60266 1144 aa12.27□□□□□ -0.44
VTI1A-205ENST00000483122 PSMD10O75832 226 aa12.27□□□□□ -0.44
VTI1A-205ENST00000483122 ELK3P41970 407 aa12.27□□□□□ -0.44
VTI1A-205ENST00000483122 COPAP53621 1224 aa12.27□□□□□ -0.44
VTI1A-205ENST00000483122 IRX4P78413 519 aa12.27□□□□□ -0.44
VTI1A-205ENST00000483122 SHROOM1Q2M3G4 852 aaPredicted RBP12.27□□□□□ -0.44
VTI1A-205ENST00000483122 ACTRT2Q8TDY3 377 aa12.27□□□□□ -0.44
VTI1A-205ENST00000483122 NKD2Q969F2 451 aaPredicted RBP12.27□□□□□ -0.44
VTI1A-205ENST00000483122 TRIM11Q96F44 468 aa12.27□□□□□ -0.44
VTI1A-205ENST00000483122 SGIP1Q9BQI5 828 aa12.27□□□□□ -0.44
VTI1A-205ENST00000483122 TMEM206Q9H813 350 aa12.27□□□□□ -0.44
VTI1A-205ENST00000483122 AK5Q9Y6K8 562 aa12.27□□□□□ -0.44
VTI1A-205ENST00000483122 RBBP6Q7Z6E9 1792 aaKnown RBP12.27□□□□□ -0.45
VTI1A-205ENST00000483122 hCG_1818297A0A087WSY0 165 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 KBTBD13C9JR72 458 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 SNNO75324 88 aaPredicted RBP12.27□□□□□ -0.45
VTI1A-205ENST00000483122 TRPA1O75762 1119 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 ZMPSTE24O75844 475 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 PDGFRBP09619 1106 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms