RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 PCDHB8Q9UN66 801 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 BRCA2P51587 3418 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 GOLGA6L10A6NI86 522 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 GOLGA8KD6RF30 607 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 APOC4-APOC2K7ER74 178 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 TULP2O00295 520 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 PIK3R2O00459 728 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 LIASO43766 372 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 AP1G2O75843 785 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 APOC2P02655 101 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 IBSPP21815 317 aaPredicted RBP9.77□□□□□ -0.85
SMC1A-205ENST00000469129 RGS19P49795 217 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 VCPP55072 806 aaKnown RBP9.77□□□□□ -0.85
SMC1A-205ENST00000469129 FAM189BP81408 668 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 CBX1P83916 185 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 RNASELQ05823 741 aaKnown RBP9.77□□□□□ -0.85
SMC1A-205ENST00000469129 DSC1Q08554 894 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 SNX1Q13596 522 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 BYSLQ13895 437 aaKnown RBP9.77□□□□□ -0.85
SMC1A-205ENST00000469129 MBTPS1Q14703 1052 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 SLMAPQ14BN4 828 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 CDO1Q16878 200 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 SMTNL2Q2TAL5 461 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 CCDC14Q49A88 953 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 TIGD5Q53EQ6 642 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 KAZNQ674X7 775 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 OVOS1Q6IE37 1185 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 LRIG3Q6UXM1 1119 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 C4orf50Q6ZRC1 276 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 STRADAQ7RTN6 431 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 GSTA5Q7RTV2 222 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 TMC3Q7Z5M5 1100 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 DDX42Q86XP3 938 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMC1A-205ENST00000469129 RFX6Q8HWS3 928 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 CMASQ8NFW8 434 aaPredicted RBP9.77□□□□□ -0.85
SMC1A-205ENST00000469129 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.77□□□□□ -0.85
SMC1A-205ENST00000469129 LINC01599Q8WXQ3 324 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 RAPGEF5Q92565 580 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 HSPH1Q92598 858 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 NKD2Q969F2 451 aaPredicted RBP9.77□□□□□ -0.85
SMC1A-205ENST00000469129 PIWIL1Q96J94 861 aaKnown RBP9.77□□□□□ -0.85
SMC1A-205ENST00000469129 GDAP1L1Q96MZ0 367 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 HINFPQ9BQA5 517 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 ZNF670Q9BS34 389 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 DDX23Q9BUQ8 820 aaKnown RBP9.77□□□□□ -0.85
SMC1A-205ENST00000469129 TMEM106CQ9BVX2 250 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 CALN1Q9BXU9 219 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 MAK16Q9BXY0 300 aaKnown RBP9.77□□□□□ -0.85
SMC1A-205ENST00000469129 FOXP3Q9BZS1 431 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 PRDM16Q9HAZ2 1276 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 PNPLA8Q9NP80 782 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 CNGB3Q9NQW8 809 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMC1A-205ENST00000469129 RRN3Q9NYV6 651 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 PCSK1NQ9UHG2 260 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 LRFN2Q9ULH4 789 aa9.77□□□□□ -0.85
SMC1A-205ENST00000469129 DRG1Q9Y295 367 aaKnown RBP9.77□□□□□ -0.85
SMC1A-205ENST00000469129 GREB1Q4ZG55 1949 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 C3orf70A6NLC5 250 aaPredicted RBP9.76□□□□□ -0.85
SMC1A-205ENST00000469129 MCF2LO15068 1137 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 PPFIA2O75334 1257 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 GRAP2O75791 330 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 ZNF189O75820 626 aaPredicted RBP9.76□□□□□ -0.85
SMC1A-205ENST00000469129 ITGAVP06756 1048 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 FAM153BP0C7A2 387 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 CCL5P13501 91 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 KRT10P13645 584 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 ITIH2P19823 946 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 TGM2P21980 687 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 IL1R2P27930 398 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 MATKP42679 507 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 RPL21P46778 160 aaKnown RBP9.76□□□□□ -0.85
SMC1A-205ENST00000469129 SULT1E1P49888 294 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 AIF1P55008 147 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 PLTPP55058 493 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 CDH6P55285 790 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 MRPS5P82675 430 aaKnown RBP9.76□□□□□ -0.85
SMC1A-205ENST00000469129 ATP11AP98196 1134 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 MLLT1Q03111 559 aaPredicted RBP9.76□□□□□ -0.85
SMC1A-205ENST00000469129 YWHAHQ04917 246 aaPredicted RBP9.76□□□□□ -0.85
SMC1A-205ENST00000469129 MTFR1Q15390 333 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 C15orf59Q2T9L4 293 aaPredicted RBP9.76□□□□□ -0.85
SMC1A-205ENST00000469129 FAM153CQ494X1 144 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 ATP13A4Q4VNC1 1196 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 PLEKHG4Q58EX7 1191 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 CLLU1OSQ5K130 101 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 TXNRD3NBQ6F5E7 133 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 CROCCP2Q86T23 111 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 PSTKQ8IV42 348 aaKnown RBP9.76□□□□□ -0.85
SMC1A-205ENST00000469129 SCUBE3Q8IX30 993 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 SCML4Q8N228 414 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 ARFGAP1Q8N6T3 406 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 ATG4AQ8WYN0 398 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 IRGQQ8WZA9 623 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 CENPIQ92674 756 aaPredicted RBP9.76□□□□□ -0.85
SMC1A-205ENST00000469129 ART4Q93070 314 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 MYLPFQ96A32 169 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 FAM149B1Q96BN6 582 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 PCED1BQ96HM7 432 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 CFAP57Q96MR6 1250 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms