RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 OR10T2Q8NGX3 314 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 PTCD2Q8WV60 388 aaKnown RBP12.57□□□□□ -0.4
VPS26A-204ENST00000467852 RFFLQ8WZ73 363 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 CDT1Q9H211 546 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 RPF1Q9H9Y2 349 aaKnown RBP12.57□□□□□ -0.4
VPS26A-204ENST00000467852 CD248Q9HCU0 757 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 ITM2CQ9NQX7 267 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 GCNT4Q9P109 453 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 DEC1Q9P2X7 70 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 TUBGCP4Q9UGJ1 667 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 ADAMTS1Q9UHI8 967 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 PCDHB6Q9Y5E3 794 aa12.57□□□□□ -0.4
VPS26A-204ENST00000467852 RBM8AQ9Y5S9 174 aaKnown RBP12.57□□□□□ -0.4
VPS26A-204ENST00000467852 TP53BP1Q12888 1972 aaPredicted RBP12.56□□□□□ -0.4
VPS26A-204ENST00000467852 MT-CO3P00414 261 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 ITGAVP06756 1048 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 ABCB4P21439 1286 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 LRPAP1P30533 357 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 ADD1P35611 737 aaKnown RBP12.56□□□□□ -0.4
VPS26A-204ENST00000467852 FOSBP53539 338 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 GAD2Q05329 585 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 ADAT2Q7Z6V5 191 aaKnown RBP12.56□□□□□ -0.4
VPS26A-204ENST00000467852 GATAD2AQ86YP4 633 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 PHTF2Q8N3S3 785 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 PIGOQ8TEQ8 1089 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 TRMT2BQ96GJ1 504 aaKnown RBP12.56□□□□□ -0.4
VPS26A-204ENST00000467852 VCPIP1Q96JH7 1222 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 HS3ST6Q96QI5 342 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 EIF2AK1Q9BQI3 630 aaKnown RBP12.56□□□□□ -0.4
VPS26A-204ENST00000467852 NUP58Q9BVL2 599 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 RCAN3Q9UKA8 241 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 BRPF3Q9ULD4 1205 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 NAP1L2Q9ULW6 460 aaPredicted RBP12.56□□□□□ -0.4
VPS26A-204ENST00000467852 STARD13Q9Y3M8 1113 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.56□□□□□ -0.4
VPS26A-204ENST00000467852 ZFHX3Q15911 3703 aa12.56□□□□□ -0.4
VPS26A-204ENST00000467852 A0A1B0GTQ1 180 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 C2orf78A6NCI8 922 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 PPFIA2O75334 1257 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 PRPF40AO75400 957 aaKnown RBP12.55□□□□□ -0.4
VPS26A-204ENST00000467852 XRCC6P12956 609 aaKnown RBP eCLIP12.55□□□□□ -0.4
VPS26A-204ENST00000467852 LSSP48449 732 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 E2F1Q01094 437 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 INSM1Q01101 510 aaPredicted RBP12.55□□□□□ -0.4
VPS26A-204ENST00000467852 ORC1Q13415 861 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 ARL13BQ3SXY8 428 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 EGFLAMQ63HQ2 1017 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 MIB1Q86YT6 1006 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 THEM5Q8N1Q8 247 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 EID2Q8N6I1 236 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 NAT16Q8N8M0 369 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 TERB1Q8NA31 727 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 STKLD1Q8NE28 680 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 BSNDQ8WZ55 320 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 SENP8Q96LD8 212 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 GABRG3Q99928 467 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 TCHPQ9BT92 498 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 OSGEPQ9NPF4 335 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 VPS54Q9P1Q0 977 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 USP36Q9P275 1121 aaKnown RBP12.55□□□□□ -0.4
VPS26A-204ENST00000467852 PCDHB5Q9Y5E4 795 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 PCDHB1Q9Y5F3 818 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 PCDHGA4Q9Y5G9 962 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 RAD54BQ9Y620 910 aa12.55□□□□□ -0.4
VPS26A-204ENST00000467852 K7ERI5 159 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 MCF2P10911 925 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 CTSKP43235 329 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 GPR15P49685 360 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 IGFBP7Q16270 282 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 METTL23Q86XA0 190 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 DCP1BQ8IZD4 617 aaKnown RBP12.54□□□□□ -0.4
VPS26A-204ENST00000467852 IFT74Q96LB3 600 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 MYRFLQ96LU7 910 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 ACOX2Q99424 681 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 ACO2Q99798 780 aaKnown RBP12.54□□□□□ -0.4
VPS26A-204ENST00000467852 HSD17B14Q9BPX1 270 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 PCED1AQ9H1Q7 454 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 POLR1BQ9H9Y6 1135 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 TM9SF3Q9HD45 589 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 HCN2Q9UL51 889 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 PCDHA4Q9UN74 947 aa12.54□□□□□ -0.4
VPS26A-204ENST00000467852 MYH10P35580 1976 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 KLF18A0A0U1RQI7 1052 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 KCNJ18B7U540 433 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 TULP3O75386 442 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 NOL4O94818 638 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 BAG4O95429 457 aaKnown RBP12.53□□□□□ -0.4
VPS26A-204ENST00000467852 ITGB2P05107 769 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 CKMT2P17540 419 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 PFKLP17858 780 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 CYP3A5P20815 502 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 PAX3P23760 479 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 TPMTP51580 245 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 RCAN1P53805 252 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 C21orf59P57076 290 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 RPL10AP62906 217 aaKnown RBP12.53□□□□□ -0.4
VPS26A-204ENST00000467852 ZXDBP98169 803 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 STARD3Q14849 445 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 SLC10A6Q3KNW5 377 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 ZSCAN23Q3MJ62 389 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms