RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 UBXN1Q04323 297 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 PDE4CQ08493 712 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 GOLGA8FQ08AF8 430 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 GOLGA8DPQ0D2H9 430 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 NR1H3Q13133 447 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 MLF2Q15773 248 aaPredicted RBP12.97□□□□□ -0.33
C9orf139-201ENST00000457302 MIIPQ5JXC2 388 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 POTEHQ6S545 545 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 PIGZQ86VD9 579 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 DDX42Q86XP3 938 aaKnown RBP eCLIP12.97□□□□□ -0.33
C9orf139-201ENST00000457302 SIX6OS1Q8N1H7 587 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 UBR7Q8N806 425 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 USP13Q92995 863 aaPredicted RBP12.97□□□□□ -0.33
C9orf139-201ENST00000457302 EXOC4Q96A65 974 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 ASIC4Q96FT7 647 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 KREMEN1Q96MU8 473 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 CDK5RAP1Q96SZ6 601 aaKnown RBP12.97□□□□□ -0.33
C9orf139-201ENST00000457302 NELL2Q99435 816 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 LSM14BQ9BX40 385 aaKnown RBP12.97□□□□□ -0.33
C9orf139-201ENST00000457302 SMG9Q9H0W8 520 aaKnown RBP12.97□□□□□ -0.33
C9orf139-201ENST00000457302 TRPV5Q9NQA5 729 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 ARHGEF3Q9NR81 526 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 GKN1Q9NS71 199 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 TMEM30AQ9NV96 361 aa12.97□□□□□ -0.33
C9orf139-201ENST00000457302 NCANO14594 1321 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 LRRC10BA6NIK2 292 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 M0QYV0 167 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 O00370 1275 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 THAP12O43422 761 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 GLULP15104 373 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 KRT9P35527 623 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 IFNAR2P48551 515 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 KIF11P52732 1056 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 FCHO2Q0JRZ9 810 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 RAPGEF1Q13905 1077 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 SNX30Q5VWJ9 437 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 GJB7Q6PEY0 223 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 C1orf228Q6PIY5 440 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 ZNF852Q6ZMS4 543 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 HFE2Q6ZVN8 426 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 ZNF606Q8WXB4 792 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 GOLGA1Q92805 767 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 C8orf33Q9H7E9 229 aaPredicted RBP12.96□□□□□ -0.33
C9orf139-201ENST00000457302 GMIPQ9P107 970 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 NAGPAQ9UK23 515 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 ARHGAP26Q9UNA1 814 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 CNTN6Q9UQ52 1028 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 DAAM1Q9Y4D1 1078 aa12.96□□□□□ -0.33
C9orf139-201ENST00000457302 FAM92AA1XBS5 289 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 SLC9A3R1O14745 358 aaPredicted RBP12.95□□□□□ -0.34
C9orf139-201ENST00000457302 TADA3O75528 432 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 PRAMEF12O95522 483 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 ZBED1O96006 694 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 RARGP13631 454 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 LCP1P13796 627 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 BRD2P25440 801 aaKnown RBP12.95□□□□□ -0.34
C9orf139-201ENST00000457302 ACADSBP45954 432 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 PLA2G4AP47712 749 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 TUBP50607 506 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 CLCN5P51795 746 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 TKTL1P51854 596 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 SLC7A9P82251 487 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 KCNMA1Q12791 1236 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 MTF1Q14872 753 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 PDGFRLQ15198 375 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 KLHDC7AQ5VTJ3 777 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 BTBD8Q5XKL5 378 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 RSRC2Q7L4I2 434 aaKnown RBP12.95□□□□□ -0.34
C9orf139-201ENST00000457302 NEK11Q8NG66 645 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 SH3RF2Q8TEC5 729 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 KCTD13Q8WZ19 329 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 MSANTD3Q96H12 275 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 HSFY1Q96LI6 401 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 NOX5Q96PH1 765 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 PRRX2Q99811 253 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 STK33Q9BYT3 514 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 RNF38Q9H0F5 515 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 PLCB1Q9NQ66 1216 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 ST7Q9NRC1 585 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 HEBP1Q9NRV9 189 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 DUS2Q9NX74 493 aaKnown RBP12.95□□□□□ -0.34
C9orf139-201ENST00000457302 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.95□□□□□ -0.34
C9orf139-201ENST00000457302 SH3BP1Q9Y3L3 701 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 HCN4Q9Y3Q4 1203 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 CEP83Q9Y592 693 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 CPQQ9Y646 472 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 MYO16Q9Y6X6 1858 aa12.95□□□□□ -0.34
C9orf139-201ENST00000457302 KANSL1LA0AUZ9 987 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 HHLA1C9JL84 531 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 LEFTY2O00292 366 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 FOXN3O00409 490 aaPredicted RBP12.94□□□□□ -0.34
C9orf139-201ENST00000457302 TLR5O60602 858 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 SERPINC1P01008 464 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 ZDHHC11BP0C7U3 371 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 UCHL3P15374 230 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 AVPR2P30518 371 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 ZNF132P52740 706 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 MLLT6P55198 1093 aaPredicted RBP12.94□□□□□ -0.34
C9orf139-201ENST00000457302 STARD6P59095 220 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 DRAP1Q14919 205 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms