RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 USP29Q9HBJ7 922 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 SNTG2Q9NY99 539 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 PRKAG3Q9UGI9 489 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 RABGEF1Q9UJ41 708 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 USP15Q9Y4E8 981 aaPredicted RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 SCN1AP35498 2009 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 CLUHO75153 1309 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 RASA4BC9J798 803 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 RASA4O43374 803 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 KPNA6O60684 536 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 SUN1O94901 812 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 RPLP2P05387 115 aaKnown RBP8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 ZNF865P0CJ78 1059 aaPredicted RBP8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 RBP3P10745 1247 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 ETS1P14921 441 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 ATP2A2P16615 1042 aaKnown RBP8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 WARSP23381 471 aaKnown RBP8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 IL4RP24394 825 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 LRPAP1P30533 357 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 SDC4P31431 198 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 CRYBB1P53674 252 aaPredicted RBP8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 CDH6P55285 790 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 GPX6P59796 221 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 RNASELQ05823 741 aaKnown RBP8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 CCDC15Q0P6D6 951 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 PDIA2Q13087 525 aaKnown RBP8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 MPP2Q14168 576 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 KCNJ11Q14654 390 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 DPYSL2Q16555 572 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 CCDC38Q502W7 563 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 SPDYAQ5MJ70 313 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 RNF43Q68DV7 783 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 PMF1Q6P1K2 205 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 STRADAQ7RTN6 431 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 UNC45BQ8IWX7 931 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 SUGP1Q8IWZ8 645 aaKnown RBP8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 PDIK1LQ8N165 341 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 TOP6BLQ8N6T0 577 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 PLD5Q8N7P1 536 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 C2orf69Q8N8R5 385 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 UBA3Q8TBC4 463 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 SPATA18Q8TC71 538 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 HAUS1Q96CS2 278 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 PWWP2AQ96N64 755 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 MRPL45Q9BRJ2 306 aaKnown RBP8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 SETD4Q9NVD3 440 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 HAUS2Q9NVX0 235 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 SF3B1O75533 1304 aaKnown RBP eCLIP8.56□□□□□ -1.044e-6■■■■■ 113.8
SPIRE1-204ENST00000440472 TRIP11Q15643 1979 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 PAPSS1O43252 624 aaPredicted RBP8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 TYROBPO43914 113 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 CSDE1O75534 798 aaKnown RBP8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 RASSF9O75901 435 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 ZWINTO95229 277 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 VIMP08670 466 aaKnown RBP8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 CD48P09326 243 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 GNAT1P11488 350 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 CYP2C9P11712 490 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 PSEN2P49810 448 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 LIG3P49916 1009 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 CPT1AP50416 773 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 GDF10P55107 478 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 MFSD10Q14728 455 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 MTFR1Q15390 333 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 SKIDA1Q1XH10 827 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 SOWAHAQ2M3V2 549 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 SMTNL2Q2TAL5 461 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 KCNT1Q5JUK3 1230 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 FBXO47Q5MNV8 452 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 RNF187Q5TA31 235 aaPredicted RBP8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 CYS1Q717R9 158 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 BNIPLQ7Z465 357 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 ZBED8Q8IZ13 594 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 PYROXD1Q8WU10 500 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 DYDC1Q8WWB3 177 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 PCDH18Q9HCL0 1135 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 PCSK1NQ9UHG2 260 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 SLC12A4Q9UP95 1085 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 ARL2BPQ9Y2Y0 163 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 STARD13Q9Y3M8 1113 aa8.56□□□□□ -1.04
SPIRE1-204ENST00000440472 CFAP73A6NFT4 308 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 HACD1B0YJ81 288 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 TRDMT1O14717 391 aaKnown RBP8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 APOL1O14791 398 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 GCATO75600 419 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 RECQL4O94761 1208 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 IFNB1P01574 187 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 TAC1P20366 129 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 PAX3P23760 479 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 STX2P32856 288 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 SKIV2L2P42285 1042 aaKnown RBP8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 SCTRP47872 440 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 NKX3-2P78367 333 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 SPARCL1Q14515 664 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 SNX17Q15036 470 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 KIZQ2M2Z5 673 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 SV2CQ496J9 727 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 GALNTL6Q49A17 601 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 UBXN11Q5T124 520 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 CYP4F22Q6NT55 531 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms