RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.53■■□□□ 1.04
NCKIPSD-206ENST00000439518 CHORDC1Q9UHD1 332 aaPredicted RBP21.53■■□□□ 1.04
NCKIPSD-206ENST00000439518 COCHO43405 550 aa21.52■■□□□ 1.04
NCKIPSD-206ENST00000439518 BEST1O76090 585 aa21.52■■□□□ 1.04
NCKIPSD-206ENST00000439518 ZDHHC11BP0C7U3 371 aa21.52■■□□□ 1.04
NCKIPSD-206ENST00000439518 PNOCQ13519 176 aa21.52■■□□□ 1.04
NCKIPSD-206ENST00000439518 SIM2Q14190 667 aaPredicted RBP21.52■■□□□ 1.04
NCKIPSD-206ENST00000439518 FILIP1Q7Z7B0 1213 aa21.52■■□□□ 1.04
NCKIPSD-206ENST00000439518 ENGASEQ8NFI3 743 aa21.52■■□□□ 1.04
NCKIPSD-206ENST00000439518 TWNKQ96RR1 684 aa21.52■■□□□ 1.04
NCKIPSD-206ENST00000439518 IMPG2Q9BZV3 1241 aa21.52■■□□□ 1.04
NCKIPSD-206ENST00000439518 TMEM8AQ9HCN3 771 aa21.52■■□□□ 1.04
NCKIPSD-206ENST00000439518 FAM49BQ9NUQ9 324 aa21.52■■□□□ 1.04
NCKIPSD-206ENST00000439518 CFAP97Q9P2B7 532 aa21.52■■□□□ 1.04
NCKIPSD-206ENST00000439518 GMEB2Q9UKD1 530 aa21.52■■□□□ 1.04
NCKIPSD-206ENST00000439518 CCDC163A0A0D9SF12 145 aa21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 SLC9A3R1O14745 358 aaPredicted RBP21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 CYP17A1P05093 508 aa21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 GTF2H1P32780 548 aa21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 OPRD1P41143 372 aa21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 TUBP50607 506 aa21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 FOXK2Q01167 660 aa21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 HECTD3Q5T447 861 aa21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 PRR23BQ6ZRT6 265 aa21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 ERMP1Q7Z2K6 904 aa21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 DDX42Q86XP3 938 aaKnown RBP eCLIP21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 EEF2KMTQ96G04 330 aa21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 ZFRQ96KR1 1074 aaKnown RBP21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 HNRNPABQ99729 332 aaKnown RBP21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 NIF3L1Q9GZT8 377 aa21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 PARD6AQ9NPB6 346 aa21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 POLR3BQ9NW08 1133 aaPredicted RBP21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 RMND1Q9NWS8 449 aa21.51■■□□□ 1.03
NCKIPSD-206ENST00000439518 RETP07949 1114 aa21.5■■□□□ 1.03
NCKIPSD-206ENST00000439518 MBL2P11226 248 aaPredicted RBP21.5■■□□□ 1.03
NCKIPSD-206ENST00000439518 MAP3K7CLP57077 242 aa21.5■■□□□ 1.03
NCKIPSD-206ENST00000439518 NUCB2P80303 420 aa21.5■■□□□ 1.03
NCKIPSD-206ENST00000439518 COBLL1Q53SF7 1204 aa21.5■■□□□ 1.03
NCKIPSD-206ENST00000439518 SPATA20Q8TB22 786 aa21.5■■□□□ 1.03
NCKIPSD-206ENST00000439518 WHAMMQ8TF30 809 aa21.5■■□□□ 1.03
NCKIPSD-206ENST00000439518 GSDMAQ96QA5 445 aa21.5■■□□□ 1.03
NCKIPSD-206ENST00000439518 NT5C1AQ9BXI3 368 aa21.5■■□□□ 1.03
NCKIPSD-206ENST00000439518 CCSER2Q9H7U1 834 aa21.5■■□□□ 1.03
NCKIPSD-206ENST00000439518 DLL3Q9NYJ7 618 aa21.5■■□□□ 1.03
NCKIPSD-206ENST00000439518 GMIPQ9P107 970 aa21.5■■□□□ 1.03
NCKIPSD-206ENST00000439518 SLC8A2Q9UPR5 921 aa21.5■■□□□ 1.03
NCKIPSD-206ENST00000439518 E2F8A0AVK6 867 aa21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 GOLGA6L4A6NEF3 574 aa21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 SCAMP3O14828 347 aaKnown RBP21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 CILPO75339 1184 aa21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 FAM200BP0CF97 657 aa21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 PRCPP42785 496 aa21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 PXNP49023 591 aaPredicted RBP21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 PGFP49763 221 aa21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 DHCR24Q15392 516 aa21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 KRT39Q6A163 491 aa21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 RHBDF2Q6PJF5 856 aa21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 SYT13Q7L8C5 426 aa21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 CAMKK1Q8N5S9 505 aa21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 RPLP0P6Q8NHW5 317 aa21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 FBXO44Q9H4M3 255 aa21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 MMRN2Q9H8L6 949 aa21.49■■□□□ 1.03
NCKIPSD-206ENST00000439518 HHLA1C9JL84 531 aa21.48■■□□□ 1.03
NCKIPSD-206ENST00000439518 CETN3O15182 167 aa21.48■■□□□ 1.03
NCKIPSD-206ENST00000439518 LRP3O75074 770 aa21.48■■□□□ 1.03
NCKIPSD-206ENST00000439518 ADORA2BP29275 332 aa21.48■■□□□ 1.03
NCKIPSD-206ENST00000439518 PUM1Q14671 1186 aaKnown RBP eCLIP21.48■■□□□ 1.03
NCKIPSD-206ENST00000439518 ZNF658Q5TYW1 1059 aaPredicted RBP21.48■■□□□ 1.03
NCKIPSD-206ENST00000439518 SEMA4DQ92854 862 aa21.48■■□□□ 1.03
NCKIPSD-206ENST00000439518 CYFIP2Q96F07 1278 aa21.48■■□□□ 1.03
NCKIPSD-206ENST00000439518 FAXDC2Q96IV6 333 aa21.48■■□□□ 1.03
NCKIPSD-206ENST00000439518 DUSP9Q99956 384 aaKnown RBP21.48■■□□□ 1.03
NCKIPSD-206ENST00000439518 TBC1D14Q9P2M4 693 aa21.48■■□□□ 1.03
NCKIPSD-206ENST00000439518 SDK1Q7Z5N4 2213 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 K7EQS6 105 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 CD58P19256 250 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 TRIM21P19474 475 aaKnown RBP21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 LMNB2Q03252 620 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 SPEM2Q0P670 501 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 CLEC20AQ6ZU45 233 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 GPRIN1Q7Z2K8 1008 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 ZC3H3Q8IXZ2 948 aaKnown RBP21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 CCDC150Q8NCX0 1101 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 CCDC26Q8TAB7 109 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 GAB3Q8WWW8 586 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 OTUB2Q96DC9 234 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 PNPLA8Q9NP80 782 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 USP18Q9UMW8 372 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 SCML2Q9UQR0 700 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 PCDHA5Q9Y5H7 936 aa21.47■■□□□ 1.03
NCKIPSD-206ENST00000439518 STX10O60499 249 aa21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 EPB41P11171 864 aaKnown RBP21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 MXI1P50539 228 aa21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 DMC1Q14565 340 aa21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 RSPO4Q2I0M5 234 aaPredicted RBP21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 CEP68Q76N32 757 aa21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 FAM160A2Q8N612 972 aaPredicted RBP21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 FBXL13Q8NEE6 735 aa21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 USP33Q8TEY7 942 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms