RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 UTP6Q9NYH9 597 aaKnown RBP14.81□□□□□ -0.04
TRAF1-201ENST00000373887 SLC25A13Q9UJS0 675 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 SNX12Q9UMY4 172 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 MTO1Q9Y2Z2 717 aaKnown RBP14.81□□□□□ -0.04
TRAF1-201ENST00000373887 TMEM120BA0PK00 339 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 FEN1P39748 380 aaKnown RBP14.81□□□□□ -0.04
TRAF1-201ENST00000373887 FXR2P51116 673 aaKnown RBP eCLIP14.81□□□□□ -0.04
TRAF1-201ENST00000373887 CBWD2Q8IUF1 395 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 DDX4Q9NQI0 724 aaKnown RBP14.81□□□□□ -0.04
TRAF1-201ENST00000373887 MAN1C1Q9NR34 630 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 TMEM150BA6NC51 233 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 SKAP2O75563 359 aaPredicted RBP14.81□□□□□ -0.04
TRAF1-201ENST00000373887 RGS4P49798 205 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 UGP2Q16851 508 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 ADGRF2Q8IZF7 708 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 RPRD1AQ96P16 312 aaPredicted RBP14.81□□□□□ -0.04
TRAF1-201ENST00000373887 PGLYRP2Q96PD5 576 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 CINPQ9BW66 212 aaPredicted RBP14.81□□□□□ -0.04
TRAF1-201ENST00000373887 CATSPERBQ9H7T0 1116 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 DDIT4Q9NX09 232 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 WWOXQ9NZC7 414 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 HEATR9A2RTY3 570 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 ATP12AP54707 1039 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 GRIK4Q16099 956 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 PTGISQ16647 500 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 CACUL1Q86Y37 369 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 RIC8BQ9NVN3 520 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 H7C4K7 107 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 AP3B1O00203 1094 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 IL1R1P14778 569 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 PBLDP30039 288 aaPredicted RBP14.81□□□□□ -0.04
TRAF1-201ENST00000373887 DSG3P32926 999 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 SPRP35270 261 aaPredicted RBP14.81□□□□□ -0.04
TRAF1-201ENST00000373887 FLT3P36888 993 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 ADCYAP1R1P41586 468 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 DGKZQ13574 1117 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 VGLL4Q14135 290 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 XRRA1Q6P2D8 792 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 RBBP8Q99708 897 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 CELF4Q9BZC1 486 aaKnown RBP14.81□□□□□ -0.04
TRAF1-201ENST00000373887 KLHL25Q9H0H3 589 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 PARVBQ9HBI1 364 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 AGO4Q9HCK5 861 aaKnown RBP14.81□□□□□ -0.04
TRAF1-201ENST00000373887 H3BRB1 525 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 TFE3P19532 575 aaPredicted RBP14.8□□□□□ -0.04
TRAF1-201ENST00000373887 POU1F1P28069 291 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 SOX6P35712 828 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 CNTN2Q02246 1040 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 EFEMP1Q12805 493 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 OVGP1Q12889 678 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 PGS1Q32NB8 556 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 SIKE1Q9BRV8 207 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 TUT1Q9H6E5 874 aaKnown RBP14.8□□□□□ -0.04
TRAF1-201ENST00000373887 WDCPQ9H6R7 721 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 TFR2Q9UP52 801 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 PSMA3P25788 255 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 IRX1P78414 480 aaPredicted RBP14.8□□□□□ -0.04
TRAF1-201ENST00000373887 CSTF3Q12996 717 aaKnown RBP14.8□□□□□ -0.04
TRAF1-201ENST00000373887 PGM5Q15124 567 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 KYNUQ16719 465 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 CALML6Q8TD86 181 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 SYTL5Q8TDW5 730 aaPredicted RBP14.8□□□□□ -0.04
TRAF1-201ENST00000373887 MORC2Q9Y6X9 1032 aaPredicted RBP14.8□□□□□ -0.04
TRAF1-201ENST00000373887 CCDC85CA6NKD9 419 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 POLBP06746 335 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 CYP11B2P19099 503 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 CCND1P24385 295 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 TRIM48Q8IWZ4 208 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 PPP2R3BQ9Y5P8 575 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 EIF3DO15371 548 aaKnown RBP eCLIP14.8□□□□□ -0.04
TRAF1-201ENST00000373887 THP07101 528 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 ZNF23P17027 643 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 ITIH2P19823 946 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 ITGA8P53708 1063 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 GRB10Q13322 594 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 NFIL3Q16649 462 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 SLC44A4Q53GD3 710 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 CENPLQ8N0S6 344 aaPredicted RBP14.8□□□□□ -0.04
TRAF1-201ENST00000373887 E2F7Q96AV8 911 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 NSL1Q96IY1 281 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 PCDHB12Q9Y5F1 795 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 VWA5AO00534 786 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 INSRRP14616 1297 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 MAGEA4P43358 317 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 ACADSBP45954 432 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 NPTX2P47972 431 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 DSG1Q02413 1049 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 TROAPQ12815 778 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 MPZL3Q6UWV2 235 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 AGPAT3Q9NRZ7 376 aa14.8□□□□□ -0.04
TRAF1-201ENST00000373887 EPHB2P29323 1055 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 GPR141Q7Z602 305 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 GMCL1P1Q8NEA9 526 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 SPATA18Q8TC71 538 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 KAZALD1Q96I82 304 aa14.79□□□□□ -0.04
TRAF1-201ENST00000373887 SPRTNQ9H040 489 aaPredicted RBP14.79□□□□□ -0.04
TRAF1-201ENST00000373887 RBM12Q9NTZ6 932 aaKnown RBP14.79□□□□□ -0.04
TRAF1-201ENST00000373887 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.79□□□□□ -0.04
TRAF1-201ENST00000373887 SP100P23497 879 aaPredicted RBP14.79□□□□□ -0.04
TRAF1-201ENST00000373887 SHMT1P34896 483 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms