RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 NRSN2Q9GZP1 204 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 TTC12Q9H892 705 aaPredicted RBP13.2□□□□□ -0.3
HDAC8-204ENST00000373560 SRPK3Q9UPE1 567 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 KCNJ18B7U540 433 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 BCAT2O15382 392 aaPredicted RBP13.19□□□□□ -0.3
HDAC8-204ENST00000373560 ZNF217O75362 1048 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 CYP11A1P05108 521 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 CSH1P0DML2 217 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 CSH2P0DML3 217 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 ADH5P11766 374 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 MYF5P13349 255 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 GRK6P43250 576 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 TNFRSF4P43489 277 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 TMPRSS3P57727 454 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 PPP2R5AQ15172 486 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 SF3A1Q15459 793 aaKnown RBP13.19□□□□□ -0.3
HDAC8-204ENST00000373560 C10orf76Q5T2E6 689 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 ETFBKMTQ8IXQ9 262 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 NAT16Q8N8M0 369 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 TOE1Q96GM8 510 aaKnown RBP13.19□□□□□ -0.3
HDAC8-204ENST00000373560 MRPL4Q9BYD3 311 aaKnown RBP13.19□□□□□ -0.3
HDAC8-204ENST00000373560 TRIM9Q9C026 710 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 HSPBP1Q9NZL4 362 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 FTSJ1Q9UET6 329 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 EIF2B4Q9UI10 523 aaKnown RBP13.19□□□□□ -0.3
HDAC8-204ENST00000373560 PCDHA12Q9UN75 941 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 PLXNA2O75051 1894 aa13.19□□□□□ -0.3
HDAC8-204ENST00000373560 NUMA1Q14980 2115 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 TTC26A0AVF1 554 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 H0Y8X5 98 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 PRPF40AO75400 957 aaKnown RBP13.18□□□□□ -0.3
HDAC8-204ENST00000373560 XRCC6P12956 609 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDAC8-204ENST00000373560 CYP2F1P24903 491 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 CD6P30203 668 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 NTSR1P30989 418 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 HNF1BP35680 557 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 EIF2DP41214 584 aaKnown RBP13.18□□□□□ -0.3
HDAC8-204ENST00000373560 TXKP42681 527 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 NPTX2P47972 431 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 KCNB1Q14721 858 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 NOLC1Q14978 699 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDAC8-204ENST00000373560 LY6G5CQ5SRR4 150 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 FBXL19Q6PCT2 694 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 DAW1Q8N136 415 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 EXD3Q8N9H8 876 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 TRMT2BQ96GJ1 504 aaKnown RBP13.18□□□□□ -0.3
HDAC8-204ENST00000373560 TCHPQ9BT92 498 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 SMPD4Q9NXE4 827 aa13.18□□□□□ -0.3
HDAC8-204ENST00000373560 WSB2Q9NYS7 404 aaPredicted RBP13.18□□□□□ -0.3
HDAC8-204ENST00000373560 LRRK2Q5S007 2527 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 ARHGEF35A5YM69 484 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 TBC1D3BA6NDS4 549 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 CCDC169A6NNP5 214 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 LACTBL1A8MY62 500 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 WASH3PC4AMC7 463 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 RFPL3O75679 317 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 BAG4O95429 457 aaKnown RBP13.17□□□□□ -0.3
HDAC8-204ENST00000373560 HDCP19113 662 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 PDIA3P30101 505 aaKnown RBP13.17□□□□□ -0.3
HDAC8-204ENST00000373560 ACADVLP49748 655 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 PEX3P56589 373 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 CALCRLQ16602 461 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 ECM1Q16610 540 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 WSCD1Q658N2 575 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 IL27RAQ6UWB1 636 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 GATAD2AQ86YP4 633 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 TERB1Q8NA31 727 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 C2orf15Q8WU43 125 aaKnown RBP13.17□□□□□ -0.3
HDAC8-204ENST00000373560 IFT74Q96LB3 600 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 MYRFLQ96LU7 910 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 RNF38Q9H0F5 515 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 ARHGAP28Q9P2N2 729 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 UBQLN1Q9UMX0 589 aaKnown RBP13.17□□□□□ -0.3
HDAC8-204ENST00000373560 PAXBP1Q9Y5B6 917 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 PCDHB5Q9Y5E4 795 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 NOTCH2Q04721 2471 aa13.17□□□□□ -0.3
HDAC8-204ENST00000373560 DOPEY1Q5JWR5 2465 aa13.16□□□□□ -0.3
HDAC8-204ENST00000373560 ENC1O14682 589 aa13.16□□□□□ -0.3
HDAC8-204ENST00000373560 HCRTO43612 131 aa13.16□□□□□ -0.3
HDAC8-204ENST00000373560 TULP3O75386 442 aa13.16□□□□□ -0.3
HDAC8-204ENST00000373560 CYP3A5P20815 502 aa13.16□□□□□ -0.3
HDAC8-204ENST00000373560 ACTN2P35609 894 aa13.16□□□□□ -0.3
HDAC8-204ENST00000373560 SSRP1Q08945 709 aaKnown RBP13.16□□□□□ -0.3
HDAC8-204ENST00000373560 C9orf57Q5W0N0 161 aa13.16□□□□□ -0.3
HDAC8-204ENST00000373560 HIC2Q96JB3 615 aa13.16□□□□□ -0.3
HDAC8-204ENST00000373560 TMEM60Q9H2L4 133 aa13.16□□□□□ -0.3
HDAC8-204ENST00000373560 SLC24A3Q9HC58 644 aa13.16□□□□□ -0.3
HDAC8-204ENST00000373560 USP36Q9P275 1121 aaKnown RBP13.16□□□□□ -0.3
HDAC8-204ENST00000373560 CPQQ9Y646 472 aa13.16□□□□□ -0.3
HDAC8-204ENST00000373560 AHCTF1Q8WYP5 2266 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 METTL12A8MUP2 240 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 TRAK2O60296 914 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 DEXIO95424 95 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 NFICP08651 508 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 CCT8P50990 548 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 USP46P62068 366 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 NR5A1Q13285 461 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 TSGA10IPQ3SY00 556 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 ZNF574Q6ZN55 896 aaPredicted RBP13.15□□□□□ -0.3
HDAC8-204ENST00000373560 CACUL1Q86Y37 369 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms