RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 METTL5Q9NRN9 209 aaKnown RBP25.28■■□□□ 1.64
CHKA-202ENST00000356135 PARVAQ9NVD7 372 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 LPXNO60711 386 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 URI1O94763 535 aaPredicted RBP25.28■■□□□ 1.64
CHKA-202ENST00000356135 RNASE9P60153 205 aaKnown RBP25.28■■□□□ 1.64
CHKA-202ENST00000356135 MTMR3Q13615 1198 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 FAM102AQ5T9C2 384 aaPredicted RBP25.28■■□□□ 1.64
CHKA-202ENST00000356135 RBM23Q86U06 439 aaKnown RBP25.28■■□□□ 1.64
CHKA-202ENST00000356135 C3orf20Q8ND61 904 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 KHSRPQ92945 711 aaKnown RBP eCLIP25.28■■□□□ 1.642e-7■□□□□ 10
CHKA-202ENST00000356135 SELENOOQ9BVL4 669 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 CAPN6Q9Y6Q1 641 aa25.28■■□□□ 1.64
CHKA-202ENST00000356135 A0A0A6YYK5 440 aaPredicted RBP25.27■■□□□ 1.64
CHKA-202ENST00000356135 ELF1P32519 619 aa25.27■■□□□ 1.64
CHKA-202ENST00000356135 TUFMP49411 452 aaKnown RBP25.27■■□□□ 1.64
CHKA-202ENST00000356135 USP46P62068 366 aa25.27■■□□□ 1.64
CHKA-202ENST00000356135 SLC6A3Q01959 620 aa25.27■■□□□ 1.64
CHKA-202ENST00000356135 PPP1R15BQ5SWA1 713 aa25.27■■□□□ 1.64
CHKA-202ENST00000356135 ADGRD2Q7Z7M1 963 aa25.27■■□□□ 1.64
CHKA-202ENST00000356135 JOSD2Q8TAC2 188 aa25.27■■□□□ 1.64
CHKA-202ENST00000356135 ZNF564Q8TBZ8 553 aaPredicted RBP25.27■■□□□ 1.64
CHKA-202ENST00000356135 PNPLA8Q9NP80 782 aa25.27■■□□□ 1.64
CHKA-202ENST00000356135 WDR35Q9P2L0 1181 aa25.27■■□□□ 1.64
CHKA-202ENST00000356135 UQCRHLA0A096LP55 91 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 PRRG1O14668 218 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 UQCRHP07919 91 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 KRT3P12035 628 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 GSCP56915 257 aaPredicted RBP25.26■■□□□ 1.63
CHKA-202ENST00000356135 SNX16P57768 344 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 RHOT2Q8IXI1 618 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 NUP93Q8N1F7 819 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 EMC1Q8N766 993 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 FEZF2Q8TBJ5 459 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 MCEEQ96PE7 176 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 GOLPH3Q9H4A6 298 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 RFC1P35251 1148 aaPredicted RBP25.26■■□□□ 1.63
CHKA-202ENST00000356135 CLCN4P51793 760 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 RPL10AP62906 217 aaKnown RBP25.26■■□□□ 1.63
CHKA-202ENST00000356135 MRPS5P82675 430 aaKnown RBP25.26■■□□□ 1.63
CHKA-202ENST00000356135 ALS2CR12Q96Q35 445 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 MRPL47Q9HD33 250 aaKnown RBP25.26■■□□□ 1.63
CHKA-202ENST00000356135 UVRAGQ9P2Y5 699 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 YIPF1Q9Y548 306 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 MRFAP1Q9Y605 127 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 USP3Q9Y6I4 520 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 SCINQ9Y6U3 715 aa25.26■■□□□ 1.63
CHKA-202ENST00000356135 SIGLEC16A6NMB1 481 aa25.25■■□□□ 1.63
CHKA-202ENST00000356135 CLASP2O75122 1294 aaKnown RBP25.25■■□□□ 1.63
CHKA-202ENST00000356135 ZBED1O96006 694 aa25.25■■□□□ 1.63
CHKA-202ENST00000356135 TUBB2AQ13885 445 aa25.25■■□□□ 1.63
CHKA-202ENST00000356135 TCEAL1Q15170 157 aa25.25■■□□□ 1.63
CHKA-202ENST00000356135 HFE2Q6ZVN8 426 aa25.25■■□□□ 1.63
CHKA-202ENST00000356135 TCEAL8Q8IYN2 117 aa25.25■■□□□ 1.63
CHKA-202ENST00000356135 TPCN2Q8NHX9 752 aa25.25■■□□□ 1.63
CHKA-202ENST00000356135 TUBB2BQ9BVA1 445 aa25.25■■□□□ 1.63
CHKA-202ENST00000356135 ANAPC7Q9UJX3 599 aa25.25■■□□□ 1.63
CHKA-202ENST00000356135 PGFP49763 221 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 DAOAP59103 153 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 OGDHQ02218 1023 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 TWF1Q12792 350 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 PTPROQ16827 1216 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 LRIT3Q3SXY7 679 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 PDE12Q6L8Q7 609 aaKnown RBP25.24■■□□□ 1.63
CHKA-202ENST00000356135 TRNP1Q6NT89 227 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 DCUN1D2Q6PH85 259 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 DENND5BQ6ZUT9 1274 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 BHLHA9Q7RTU4 235 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 ZDHHC17Q8IUH5 632 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 KREMEN2Q8NCW0 462 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 SPATA17Q96L03 361 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 ZNF576Q9H609 170 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 CNGB3Q9NQW8 809 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 HSFX1Q9UBD0 423 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 TMEM59LQ9UK28 342 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 INSL5Q9Y5Q6 135 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 PLXNA3P51805 1871 aa25.24■■□□□ 1.63
CHKA-202ENST00000356135 TMEM191CA6NGB0 347 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 SLC38A8A6NNN8 435 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 YJEFN3A6XGL0 299 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 TMEM110-MUSTN1A8MSY1 372 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 E7ENQ6 273 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 PALMO75781 387 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 GLUD1P00367 558 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 CPNE8Q86YQ8 564 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 SLC7A14Q8TBB6 771 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 FBXW11Q9UKB1 542 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 MAGED2Q9UNF1 606 aaPredicted RBP25.23■■□□□ 1.63
CHKA-202ENST00000356135 GRID2IPA4D2P6 1211 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 CTIFO43310 598 aaKnown RBP25.23■■□□□ 1.63
CHKA-202ENST00000356135 BUB1BO60566 1050 aaPredicted RBP25.23■■□□□ 1.63
CHKA-202ENST00000356135 MTA2O94776 668 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 SLU7O95391 586 aaKnown RBP25.23■■□□□ 1.63
CHKA-202ENST00000356135 ALDH1A3P47895 512 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 AMPD2Q01433 879 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 MESDQ14696 234 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 PM20D1Q6GTS8 502 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 HYOU1Q9Y4L1 999 aa25.23■■□□□ 1.63
CHKA-202ENST00000356135 EPCAMP16422 314 aa25.22■■□□□ 1.63
CHKA-202ENST00000356135 FLT3P36888 993 aa25.22■■□□□ 1.63
CHKA-202ENST00000356135 RBM10P98175 930 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms