RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 C2CD4BA6NLJ0 364 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 KBTBD13C9JR72 458 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 E7ESA3 106 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 CHUKO15111 745 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 PRPF4O43172 522 aaKnown RBP eCLIP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 CALB1P05937 261 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ABHD2P08910 425 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 KRT15P19012 456 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 CA4P22748 312 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 RBL1P28749 1068 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 PTPN7P35236 360 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ADCYAP1R1P41586 468 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ETV4P43268 484 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 CRADDP78560 199 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 NR1H3Q13133 447 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 PIGHQ14442 188 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 SPARCL1Q14515 664 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 MORF4L2Q15014 288 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 HIF1AQ16665 826 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 LRRC38Q5VT99 294 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ZNF449Q6P9G9 518 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ADGRD1Q6QNK2 874 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ARMC9Q7Z3E5 817 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 KCTD6Q8NC69 237 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 SPATA18Q8TC71 538 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 TMEM176AQ96HP8 235 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 RBM41Q96IZ5 413 aaKnown RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 CEP41Q9BYV8 373 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 GOLGA2P5Q9HBQ8 144 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 PCDH9Q9HC56 1237 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 TSPAN16Q9UKR8 245 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 MRPL42Q9Y6G3 142 aaKnown RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 TEX264Q9Y6I9 313 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 DICER1Q9UPY3 1922 aaKnown RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 I6L893 689 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 SPTLC1O15269 473 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 MAP3K13O43283 966 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 ANP32DO95626 131 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 LSM8O95777 96 aaKnown RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 POTEJP0CG39 1038 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 RBP3P10745 1247 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 EPHB2P29323 1055 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 HOXA11P31270 313 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 GABRB2P47870 512 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 EIF3EP60228 445 aaKnown RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 BASP1P80723 227 aaKnown RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 MRPS5P82675 430 aaKnown RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 CAV1Q03135 178 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 GBE1Q04446 702 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 BMPR2Q13873 1038 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 KCNJ11Q14654 390 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 FAM102AQ5T9C2 384 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 WDR78Q5VTH9 848 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 ACOT1Q86TX2 421 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 MTDHQ86UE4 582 aaKnown RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 TDRPQ86YL5 185 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 RFX6Q8HWS3 928 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 APOBEC3FQ8IUX4 373 aaKnown RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 CCDC110Q8TBZ0 833 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 HEXIM2Q96MH2 286 aaKnown RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 MMP19Q99542 508 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 C16orf70Q9BSU1 422 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 KATNBL1Q9H079 304 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 LHX5Q9H2C1 402 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 ANLNQ9NQW6 1124 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 MTMR10Q9NXD2 777 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 VCANP13611 3396 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 PAPSS1O43252 624 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 DKC1O60832 514 aaKnown RBP eCLIP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 SKAP2O75563 359 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 AFF1P51825 1210 aaKnown RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 HDAC4P56524 1084 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 FOXD4Q12950 439 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 NEDD9Q14511 834 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 PDK4Q16654 411 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 SOWAHAQ2M3V2 549 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 NBPF20Q3BBV1 942 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 PKDCCQ504Y2 493 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 TAF1BQ53T94 588 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-201ENST00000347613 RNF43Q68DV7 783 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 ANKS4BQ8N8V4 417 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 RNF169Q8NCN4 708 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 TMEM40Q8WWA1 233 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 PLVAPQ9BX97 442 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 RNF39Q9H2S5 420 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 ETNK1Q9HBU6 452 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 ARHGEF4Q9NR80 690 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 AGTPBP1Q9UPW5 1226 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 HEY1Q9Y5J3 304 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 TSPAN1O60635 241 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 ENTPD5O75356 428 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 BEST1O76090 585 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 UNC5CO95185 931 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 GSRP00390 522 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 PYGBP11216 843 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 BGNP21810 368 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 ARRB2P32121 409 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 MSH2P43246 934 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 CDH6P55285 790 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 GEMIN4P57678 1058 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms