RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 PCED1BQ96HM7 432 aa26.42■■□□□ 1.82
TRADD-201ENST00000345057 PKNOX2Q96KN3 472 aa26.42■■□□□ 1.82
TRADD-201ENST00000345057 FAM193BQ96PV7 902 aaPredicted RBP26.42■■□□□ 1.82
TRADD-201ENST00000345057 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.42■■□□□ 1.82
TRADD-201ENST00000345057 DRG1Q9Y295 367 aaKnown RBP26.42■■□□□ 1.82
TRADD-201ENST00000345057 LIASO43766 372 aa26.41■■□□□ 1.82
TRADD-201ENST00000345057 OPA1O60313 960 aa26.41■■□□□ 1.82
TRADD-201ENST00000345057 CCL5P13501 91 aa26.41■■□□□ 1.82
TRADD-201ENST00000345057 RPL21P46778 160 aaKnown RBP26.41■■□□□ 1.82
TRADD-201ENST00000345057 DSC1Q08554 894 aa26.41■■□□□ 1.82
TRADD-201ENST00000345057 ADIGQ0VDE8 80 aa26.41■■□□□ 1.82
TRADD-201ENST00000345057 BYSLQ13895 437 aaKnown RBP26.41■■□□□ 1.82
TRADD-201ENST00000345057 TAF5Q15542 800 aa26.41■■□□□ 1.82
TRADD-201ENST00000345057 BBS12Q6ZW61 710 aa26.41■■□□□ 1.82
TRADD-201ENST00000345057 BBOF1Q8ND07 529 aa26.41■■□□□ 1.82
TRADD-201ENST00000345057 HSPH1Q92598 858 aa26.41■■□□□ 1.82
TRADD-201ENST00000345057 ACSF2Q96CM8 615 aaPredicted RBP26.41■■□□□ 1.82
TRADD-201ENST00000345057 DDX23Q9BUQ8 820 aaKnown RBP26.41■■□□□ 1.82
TRADD-201ENST00000345057 NEUROG2Q9H2A3 272 aa26.41■■□□□ 1.82
TRADD-201ENST00000345057 ZDHHC18Q9NUE0 388 aa26.41■■□□□ 1.82
TRADD-201ENST00000345057 ASIC3Q9UHC3 531 aa26.41■■□□□ 1.82
TRADD-201ENST00000345057 DNAH12Q6ZR08 3092 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 CLDN5O00501 218 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 AP1G2O75843 785 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 ITIH2P19823 946 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 MRPS5P82675 430 aaKnown RBP26.4■■□□□ 1.82
TRADD-201ENST00000345057 ATP11AP98196 1134 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 CAV1Q03135 178 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 INTS6LQ5JSJ4 861 aaKnown RBP26.4■■□□□ 1.82
TRADD-201ENST00000345057 CLLU1OSQ5K130 101 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 STRADAQ7RTN6 431 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 ABI1Q8IZP0 508 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 CENPIQ92674 756 aaPredicted RBP26.4■■□□□ 1.82
TRADD-201ENST00000345057 MAK16Q9BXY0 300 aaKnown RBP26.4■■□□□ 1.82
TRADD-201ENST00000345057 PCDHB8Q9UN66 801 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 MYBPHLA2RUH7 354 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 NDC80O14777 642 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 MDM4O15151 490 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 TRAPPC3O43617 180 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 BRCC3P46736 316 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 PLTPP55058 493 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 MAP3K7CLP57077 242 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 TSPY1Q01534 308 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 RNASELQ05823 741 aaKnown RBP26.4■■□□□ 1.82
TRADD-201ENST00000345057 TFDP2Q14188 446 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 OVOS1Q6IE37 1185 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 CD300LGQ6UXG3 332 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 TSEN2Q8NCE0 465 aaKnown RBP26.4■■□□□ 1.82
TRADD-201ENST00000345057 SNF8Q96H20 258 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 TSPYL1Q9H0U9 437 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.4■■□□□ 1.82
TRADD-201ENST00000345057 GRHL1Q9NZI5 618 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 PCDHB7Q9Y5E2 793 aa26.4■■□□□ 1.82
TRADD-201ENST00000345057 HOXA2O43364 376 aa26.39■■□□□ 1.82
TRADD-201ENST00000345057 NBNO60934 754 aa26.39■■□□□ 1.82
TRADD-201ENST00000345057 DAB1O75553 588 aa26.39■■□□□ 1.82
TRADD-201ENST00000345057 ENDOD1O94919 500 aa26.39■■□□□ 1.82
TRADD-201ENST00000345057 MATKP42679 507 aa26.39■■□□□ 1.82
TRADD-201ENST00000345057 PAN2Q504Q3 1202 aaKnown RBP26.39■■□□□ 1.82
TRADD-201ENST00000345057 SCYL2Q6P3W7 929 aa26.39■■□□□ 1.82
TRADD-201ENST00000345057 FAM171BQ6P995 826 aa26.39■■□□□ 1.82
TRADD-201ENST00000345057 GSTA5Q7RTV2 222 aa26.39■■□□□ 1.82
TRADD-201ENST00000345057 NKD2Q969F2 451 aaPredicted RBP26.39■■□□□ 1.82
TRADD-201ENST00000345057 C11orf84Q9BUA3 381 aaPredicted RBP26.39■■□□□ 1.82
TRADD-201ENST00000345057 CALN1Q9BXU9 219 aa26.39■■□□□ 1.82
TRADD-201ENST00000345057 TSC2P49815 1807 aa26.39■■□□□ 1.81
TRADD-201ENST00000345057 ZNF487B1APH4 448 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 ATF2P15336 505 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 CDH6P55285 790 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 YWHAZP63104 245 aaKnown RBP26.38■■□□□ 1.81
TRADD-201ENST00000345057 KRT81Q14533 505 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 MTFR1Q15390 333 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 SH3PXD2AQ5TCZ1 1133 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 CLEC4CQ8WTT0 213 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 ART4Q93070 314 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 PEBP4Q96S96 227 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 CNGB3Q9NQW8 809 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 STAP1Q9ULZ2 295 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 I3L4J1 428 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 CST8O60676 142 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 VCPP55072 806 aaKnown RBP26.38■■□□□ 1.81
TRADD-201ENST00000345057 ADCY2Q08462 1091 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 TMC3Q7Z5M5 1100 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 RFX6Q8HWS3 928 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 COLGALT2Q8IYK4 626 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 DBF4BQ8NFT6 615 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 FAM149B1Q96BN6 582 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 CSNK1G1Q9HCP0 422 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 TBC1D13Q9NVG8 400 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 ZNF148Q9UQR1 794 aa26.38■■□□□ 1.81
TRADD-201ENST00000345057 ENPP3O14638 875 aa26.37■■□□□ 1.81
TRADD-201ENST00000345057 ITGAVP06756 1048 aa26.37■■□□□ 1.81
TRADD-201ENST00000345057 GGCXP38435 758 aa26.37■■□□□ 1.81
TRADD-201ENST00000345057 TKTL1P51854 596 aa26.37■■□□□ 1.81
TRADD-201ENST00000345057 YWHAHQ04917 246 aaPredicted RBP26.37■■□□□ 1.81
TRADD-201ENST00000345057 ADCY1Q08828 1119 aa26.37■■□□□ 1.81
TRADD-201ENST00000345057 SLC25A52Q3SY17 297 aa26.37■■□□□ 1.81
TRADD-201ENST00000345057 ZDHHC24Q6UX98 284 aa26.37■■□□□ 1.81
TRADD-201ENST00000345057 CYP4V2Q6ZWL3 525 aaPredicted RBP26.37■■□□□ 1.81
TRADD-201ENST00000345057 IQCKQ8N0W5 287 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms