RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 DRICH1Q6PGQ1 229 aaPredicted RBP12.45□□□□□ -0.42
TRIM40-205ENST00000307859 FAM43BQ6ZT52 329 aaPredicted RBP12.45□□□□□ -0.42
TRIM40-205ENST00000307859 CYP4V2Q6ZWL3 525 aaPredicted RBP12.45□□□□□ -0.42
TRIM40-205ENST00000307859 SCUBE3Q8IX30 993 aa12.45□□□□□ -0.42
TRIM40-205ENST00000307859 CMASQ8NFW8 434 aaPredicted RBP12.45□□□□□ -0.42
TRIM40-205ENST00000307859 GRK7Q8WTQ7 553 aa12.45□□□□□ -0.42
TRIM40-205ENST00000307859 ATG4AQ8WYN0 398 aa12.45□□□□□ -0.42
TRIM40-205ENST00000307859 ACSF2Q96CM8 615 aaPredicted RBP12.45□□□□□ -0.42
TRIM40-205ENST00000307859 NCAPGQ9BPX3 1015 aa12.45□□□□□ -0.42
TRIM40-205ENST00000307859 SYT15Q9BQS2 421 aa12.45□□□□□ -0.42
TRIM40-205ENST00000307859 FTHL17Q9BXU8 183 aa12.45□□□□□ -0.42
TRIM40-205ENST00000307859 B3GNT5Q9BYG0 378 aa12.45□□□□□ -0.42
TRIM40-205ENST00000307859 FAM129AQ9BZQ8 928 aa12.45□□□□□ -0.42
TRIM40-205ENST00000307859 ZWILCHQ9H900 591 aa12.45□□□□□ -0.42
TRIM40-205ENST00000307859 MED4Q9NPJ6 270 aa12.45□□□□□ -0.42
TRIM40-205ENST00000307859 CRTAC1Q9NQ79 661 aa12.45□□□□□ -0.42
TRIM40-205ENST00000307859 GRHL1Q9NZI5 618 aa12.45□□□□□ -0.42
TRIM40-205ENST00000307859 CDH9Q9ULB4 789 aa12.45□□□□□ -0.42
TRIM40-205ENST00000307859 USP18Q9UMW8 372 aa12.45□□□□□ -0.42
TRIM40-205ENST00000307859 M0QZQ0 153 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 ODC1P11926 461 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 KRT10P13645 584 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 KDELR1P24390 212 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 OAS2P29728 719 aaKnown RBP12.44□□□□□ -0.42
TRIM40-205ENST00000307859 PTPN9P43378 593 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 RPL21P46778 160 aaKnown RBP12.44□□□□□ -0.42
TRIM40-205ENST00000307859 ADCY2Q08462 1091 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 BFSP2Q13515 415 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 SNX1Q13596 522 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 PTK6Q13882 451 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 TAF5Q15542 800 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 CCDC142Q17RM4 750 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 SMTNL2Q2TAL5 461 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 ODF2Q5BJF6 829 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 MDH1BQ5I0G3 518 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 ZFYVE27Q5T4F4 411 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 ALS2CLQ60I27 953 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 ZDHHC24Q6UX98 284 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 PIGZQ86VD9 579 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 KCTD13Q8WZ19 329 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 PEBP4Q96S96 227 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 RTP3Q9BQQ7 232 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 C11orf84Q9BUA3 381 aaPredicted RBP12.44□□□□□ -0.42
TRIM40-205ENST00000307859 TRIM31Q9BZY9 425 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 FEZ2Q9UHY8 353 aaPredicted RBP12.44□□□□□ -0.42
TRIM40-205ENST00000307859 INPP5FQ9Y2H2 1132 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 NEU2Q9Y3R4 380 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 GOLGA6BA6NDN3 693 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 AGPSO00116 658 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 CLDN5O00501 218 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 LIASO43766 372 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 GRAP2O75791 330 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 B3GAT3O94766 335 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 ENDOD1O94919 500 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 GAS8O95995 478 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 PCSK1P29120 753 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 SDC4P31431 198 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 ARSEP51690 589 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 SLC8A3P57103 927 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 KRT17Q04695 432 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 DSC1Q08554 894 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 KCTD19Q17RG1 926 aaPredicted RBP12.44□□□□□ -0.42
TRIM40-205ENST00000307859 LRRC26Q2I0M4 334 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 C15orf59Q2T9L4 293 aaPredicted RBP12.44□□□□□ -0.42
TRIM40-205ENST00000307859 CLLU1OSQ5K130 101 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 SH3PXD2AQ5TCZ1 1133 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 DCLRE1AQ6PJP8 1040 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 GLB1LQ6UWU2 654 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 CLEC20AQ6ZU45 233 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 BBS12Q6ZW61 710 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 ATL2Q8NHH9 583 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 CLEC4CQ8WTT0 213 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 TEKT4Q8WW24 435 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 LRRC45Q96CN5 670 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 CFAP57Q96MR6 1250 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 TXLNGYQ9BZA5 131 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 TTYH1Q9H313 450 aaPredicted RBP12.44□□□□□ -0.42
TRIM40-205ENST00000307859 PCSK1NQ9UHG2 260 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 DSEQ9UL01 958 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 SNX24Q9Y343 169 aa12.44□□□□□ -0.42
TRIM40-205ENST00000307859 ARHGEF37A1IGU5 675 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 TMEM189-UBE2V1I3L0A0 370 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 PITPNM1O00562 1244 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 NBNO60934 754 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 BEST1O76090 585 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 FAM200BP0CF97 657 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 LCP1P13796 627 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 DESP17661 470 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 ADCY1Q08828 1119 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 GPNMBQ14956 572 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 PPP1R7Q15435 360 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 PLEKHG4Q58EX7 1191 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 KCNT1Q5JUK3 1230 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 KAZNQ674X7 775 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 TMC3Q7Z5M5 1100 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 FAM35AQ86V20 835 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 IQCKQ8N0W5 287 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 MYCBPAPQ8TBZ2 947 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 FAM71BQ8TC56 605 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 ATXN2LQ8WWM7 1075 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms