RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 PDSS2Q86YH6 399 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 CFAP57Q96MR6 1250 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 MRPL1Q9BYD6 325 aaKnown RBP16.9■□□□□ 0.3
CCDC8-201ENST00000307522 TXNRD2Q9NNW7 524 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 CSADQ9Y600 493 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 LOC100653049A0A140TA62 436 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 KRT34O76011 436 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 GTF2H1P32780 548 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 SH2D4BQ5SQS7 431 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 ARMCX6Q7L4S7 300 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 CPA5Q8WXQ8 436 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 TEX13BQ9BXU2 312 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 UBAP1Q9NZ09 502 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 LRRIQ4A6NIV6 560 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 CYB561D2O14569 222 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 TFAP2AP05549 437 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 PDGFRBP09619 1106 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 C6orf222P0C671 652 aaPredicted RBP16.89■□□□□ 0.29
CCDC8-201ENST00000307522 CCDC166P0CW27 439 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 RXRGP48443 463 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 ARSEP51690 589 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 NAA20P61599 178 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 FOLH1Q04609 750 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 TLR1Q15399 786 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 MAP1SQ66K74 1059 aaPredicted RBP16.89■□□□□ 0.29
CCDC8-201ENST00000307522 NCCRP1Q6ZVX7 275 aaPredicted RBP16.89■□□□□ 0.29
CCDC8-201ENST00000307522 UPF1Q92900 1129 aaKnown RBP eCLIP16.89■□□□□ 0.29
CCDC8-201ENST00000307522 EBF4Q9BQW3 602 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 AS3MTQ9HBK9 375 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 FAF1Q9UNN5 650 aaPredicted RBP16.89■□□□□ 0.29
CCDC8-201ENST00000307522 LZTS1Q9Y250 596 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 SNCAIPQ9Y6H5 919 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 PRPF4O43172 522 aaKnown RBP eCLIP16.89■□□□□ 0.29
CCDC8-201ENST00000307522 CAPN15O75808 1086 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 ADRB2P07550 413 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 DLDP09622 509 aaKnown RBP16.89■□□□□ 0.29
CCDC8-201ENST00000307522 MLH1P40692 756 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 CYTH1Q15438 398 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 DHDDSQ86SQ9 333 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 VSIG10LQ86VR7 867 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 RNF19AQ9NV58 838 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 SH3GLB1Q9Y371 365 aa16.89■□□□□ 0.29
CCDC8-201ENST00000307522 HNRNPDLO14979 420 aaKnown RBP16.88■□□□□ 0.29
CCDC8-201ENST00000307522 FAM155BO75949 473 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 TOP3BO95985 862 aaKnown RBP16.88■□□□□ 0.29
CCDC8-201ENST00000307522 SMIM18P0DKX4 95 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 UQCRBP14927 111 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 NPTX2P47972 431 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 EMP3P54852 163 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 ACTR3P61158 418 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 ACTR2P61160 394 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 PRKCEQ02156 737 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 CYLC2Q14093 348 aaPredicted RBP16.88■□□□□ 0.29
CCDC8-201ENST00000307522 PASD1Q8IV76 773 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 GALNT4Q8N4A0 578 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 LRRC71Q8N4P6 559 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 NSUN6Q8TEA1 469 aaKnown RBP16.88■□□□□ 0.29
CCDC8-201ENST00000307522 DGCR14Q96DF8 476 aaKnown RBP16.88■□□□□ 0.29
CCDC8-201ENST00000307522 RIT2Q99578 217 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 GINM1Q9NU53 330 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 DNPEPQ9ULA0 475 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 SMG5Q9UPR3 1016 aaKnown RBP16.88■□□□□ 0.29
CCDC8-201ENST00000307522 HTTP42858 3142 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 WDR64B1ANS9 1081 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 FSCN2O14926 492 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 SLC5A2P31639 672 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 CHN2P52757 468 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 DYNLT1P63172 113 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 KLC3Q6P597 504 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 CATSPERGQ6ZRH7 1159 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 POMGNT1Q8WZA1 660 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 SRPK1Q96SB4 655 aaKnown RBP16.88■□□□□ 0.29
CCDC8-201ENST00000307522 FAM213AQ9BRX8 229 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 BRD8Q9H0E9 1235 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 HSPBP1Q9NZL4 362 aa16.88■□□□□ 0.29
CCDC8-201ENST00000307522 RBMX2Q9Y388 322 aaKnown RBP16.88■□□□□ 0.29
CCDC8-201ENST00000307522 GGPS1O95749 300 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 TCF4P15884 667 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 RAG1P15918 1043 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 CCND2P30279 289 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 ZBTB41Q5SVQ8 909 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 DENND5BQ6ZUT9 1274 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 ZC3H3Q8IXZ2 948 aaKnown RBP16.87■□□□□ 0.29
CCDC8-201ENST00000307522 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.87■□□□□ 0.29
CCDC8-201ENST00000307522 TMIGD2Q96BF3 282 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 MMP19Q99542 508 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 SYT17Q9BSW7 474 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 JPH1Q9HDC5 661 aaPredicted RBP16.87■□□□□ 0.29
CCDC8-201ENST00000307522 KMT5AQ9NQR1 393 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 XPNPEP1Q9NQW7 623 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 BARX2Q9UMQ3 279 aaPredicted RBP16.87■□□□□ 0.29
CCDC8-201ENST00000307522 PCDHA10Q9Y5I2 948 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 TMX2-CTNND1H3BSU7 103 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 XPO1O14980 1071 aaKnown RBP16.87■□□□□ 0.29
CCDC8-201ENST00000307522 LPXNO60711 386 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 ZNF24P17028 368 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 PPIDQ08752 370 aaKnown RBP16.87■□□□□ 0.29
CCDC8-201ENST00000307522 HSF5Q4G112 596 aaPredicted RBP16.87■□□□□ 0.29
CCDC8-201ENST00000307522 AMIGO2Q86SJ2 522 aa16.87■□□□□ 0.29
CCDC8-201ENST00000307522 ZBTB33Q86T24 672 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms