RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 YWHAGP61981 247 aaKnown RBP eCLIP11.96□□□□□ -0.49
TROAP-201ENST00000257909 TAP1Q03518 808 aa11.96□□□□□ -0.49
TROAP-201ENST00000257909 DCTN2Q13561 401 aaKnown RBP11.96□□□□□ -0.49
TROAP-201ENST00000257909 GRAMD1BQ3KR37 738 aa11.96□□□□□ -0.49
TROAP-201ENST00000257909 OGFRL1Q5TC84 451 aaPredicted RBP11.96□□□□□ -0.49
TROAP-201ENST00000257909 WDR78Q5VTH9 848 aa11.96□□□□□ -0.49
TROAP-201ENST00000257909 HHIPL2Q6UWX4 724 aa11.96□□□□□ -0.49
TROAP-201ENST00000257909 ARCQ7LC44 396 aa11.96□□□□□ -0.49
TROAP-201ENST00000257909 RTKN2Q8IZC4 609 aa11.96□□□□□ -0.49
TROAP-201ENST00000257909 CCDC33Q8N5R6 958 aa11.96□□□□□ -0.49
TROAP-201ENST00000257909 TMEM161BQ8NDZ6 487 aa11.96□□□□□ -0.49
TROAP-201ENST00000257909 DNAJC1Q96KC8 554 aaKnown RBP11.96□□□□□ -0.49
TROAP-201ENST00000257909 MXRA8Q9BRK3 442 aa11.96□□□□□ -0.49
TROAP-201ENST00000257909 THAP1Q9NVV9 213 aa11.96□□□□□ -0.49
TROAP-201ENST00000257909 PI4KBQ9UBF8 816 aa11.96□□□□□ -0.49
TROAP-201ENST00000257909 MARCOQ9UEW3 520 aaPredicted RBP11.96□□□□□ -0.49
TROAP-201ENST00000257909 CDH22Q9UJ99 828 aa11.96□□□□□ -0.49
TROAP-201ENST00000257909 DTNAQ9Y4J8 743 aa11.96□□□□□ -0.49
TROAP-201ENST00000257909 TEX264Q9Y6I9 313 aa11.96□□□□□ -0.49
TROAP-201ENST00000257909 ASTN2O75129 1339 aaPredicted RBP11.96□□□□□ -0.5
TROAP-201ENST00000257909 F8VP50 259 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 ATP6V1G1O75348 118 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 CDK4P11802 303 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 RAG1P15918 1043 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 ACO1P21399 889 aaKnown RBP11.96□□□□□ -0.5
TROAP-201ENST00000257909 EPHB1P54762 984 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 BASP1P80723 227 aaKnown RBP11.96□□□□□ -0.5
TROAP-201ENST00000257909 ZNF252P-AS1Q0IIN9 211 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 NFIAQ12857 509 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 SNAPC2Q13487 334 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 NADK2Q4G0N4 442 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 TATDN1Q6P1N9 297 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 BORAQ6PGQ7 559 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 DCUN1D2Q6PH85 259 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 POLNQ7Z5Q5 900 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 DIS3LQ8TF46 1054 aaKnown RBP11.96□□□□□ -0.5
TROAP-201ENST00000257909 DDI1Q8WTU0 396 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 RBM38Q9H0Z9 239 aaKnown RBP11.96□□□□□ -0.5
TROAP-201ENST00000257909 POMPQ9Y244 141 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 LZTS1Q9Y250 596 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 PCDHB4Q9Y5E5 795 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 SLX4Q8IY92 1834 aa11.96□□□□□ -0.5
TROAP-201ENST00000257909 SF3B1O75533 1304 aaKnown RBP eCLIP11.95□□□□□ -0.5
TROAP-201ENST00000257909 hCG_2014768A0A024R1R8 64 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 TNFAIP8O95379 198 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 YWHABP31946 246 aaKnown RBP11.95□□□□□ -0.5
TROAP-201ENST00000257909 SERPINB8P50452 374 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 STAT2P52630 851 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 HIRAP54198 1017 aaPredicted RBP11.95□□□□□ -0.5
TROAP-201ENST00000257909 MRPS5P82675 430 aaKnown RBP11.95□□□□□ -0.5
TROAP-201ENST00000257909 STX3Q13277 289 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 DMP1Q13316 513 aaPredicted RBP11.95□□□□□ -0.5
TROAP-201ENST00000257909 RABGAP1LQ5R372 815 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 PRR5LQ6MZQ0 368 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 TMEM270Q6UE05 265 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 BBS12Q6ZW61 710 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 IGDCC3Q8IVU1 814 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 MAP7D3Q8IWC1 876 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 AHI1Q8N157 1196 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 NIPA2Q8N8Q9 360 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 MCEEQ96PE7 176 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 EBF4Q9BQW3 602 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 GPRC5CQ9NQ84 441 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 C6orf203Q9P0P8 240 aaPredicted RBP11.95□□□□□ -0.5
TROAP-201ENST00000257909 RAB26Q9ULW5 256 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 APOBEC2Q9Y235 224 aaKnown RBP11.95□□□□□ -0.5
TROAP-201ENST00000257909 CCDC195A0A1B0GUA6 201 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 BPGMP07738 259 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 ALDH1A3P47895 512 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 CBLBQ13191 982 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 CUL2Q13617 745 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 TLR1Q15399 786 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 ABCB5Q2M3G0 1257 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 RALGPS1Q5JS13 557 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 FAM102BQ5T8I3 360 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 TXNRD3NBQ6F5E7 133 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 APOBEC3HQ6NTF7 200 aaKnown RBP11.95□□□□□ -0.5
TROAP-201ENST00000257909 DNAJC24Q6P3W2 148 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 ZNF554Q86TJ5 538 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 KBTBD6Q86V97 674 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 GAB3Q8WWW8 586 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 CMTM5Q96DZ9 223 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 GCNAQ96QF7 691 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 COA1Q9GZY4 146 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 FAM96AQ9H5X1 160 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 ZNF696Q9H7X3 374 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 XAB2Q9HCS7 855 aaKnown RBP11.95□□□□□ -0.5
TROAP-201ENST00000257909 DDX18Q9NVP1 670 aaKnown RBP11.95□□□□□ -0.5
TROAP-201ENST00000257909 BTBD7Q9P203 1132 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 TELO2Q9Y4R8 837 aa11.95□□□□□ -0.5
TROAP-201ENST00000257909 RGPD3A6NKT7 1758 aaPredicted RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 RGPD4Q7Z3J3 1758 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 UBR3Q6ZT12 1888 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 C3orf70A6NLC5 250 aaPredicted RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 TRDMT1O14717 391 aaKnown RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 CST8O60676 142 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 BBOX1O75936 387 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 HLA-DRAP01903 254 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 PROCP04070 461 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 FAM163BP0C2L3 166 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms