RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Gm3182K7N6T8 263 aa23.94■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gap43P06837 227 aa23.94■■□□□ 1.42
Upf3a-201ENSMUST00000043767 YwhahP68510 246 aaKnown RBP23.94■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Pik3r6Q3U6Q4 756 aa23.94■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ctnna2Q61301 953 aa23.94■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Nr2e1Q64104 385 aa23.94■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Pcdha11Q91Y19 950 aa23.94■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Clp1Q99LI9 425 aa23.94■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Rasgef1cQ9D300 466 aa23.94■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Dnah12Q3V0Q1 3086 aa23.94■■□□□ 1.42
Upf3a-201ENSMUST00000043767 P04214 136 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 NcanP55066 1268 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ehbp1Q69ZW3 1231 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Rad9bQ6WBX7 403 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Kbtbd3Q8BHI4 607 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Anapc5Q8BTZ4 740 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ccdc134Q8C7V8 229 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Cgref1Q8R1U2 281 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Cwh43Q91YL7 699 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ascc1Q9D8Z1 356 aaKnown RBP23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Dydc1Q9D9T0 175 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 MycbpQ9EQS3 103 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 St6galnac4Q9R2B6 360 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Cpxm1Q9Z100 722 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Olfr1023A2ASU6 311 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gm10717D3Z1I8 228 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 ProcP33587 460 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Cpne7Q0VE82 557 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Pick1Q62083 416 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Zmiz2Q8CIE2 920 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Tbc1d19Q8VDV7 526 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Fam114a2Q8VE88 497 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Cox16Q9CR63 106 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 TfgQ9Z1A1 397 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Rpl9-ps1S4R1R7 191 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Plin4O88492 1403 aa23.93■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Osbpl9A2A8Z1 736 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Olfr731F8VQB9 326 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 P01652 108 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 GaltQ03249 379 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Entpd7Q3TCT4 606 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Kctd19Q562E2 927 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Xpo1Q6P5F9 1071 aaKnown RBP23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Shkbp1Q6P7W2 704 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gpatch2lQ6PE65 482 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Vwa2Q70UZ7 791 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Phf8Q80TJ7 1023 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ublcp1Q8BGR9 318 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Rhpn2Q8BWR8 686 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Caskin2Q8VHK1 1201 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Rxfp2Q91ZZ5 737 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gfra4Q9JJT2 260 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 GgcxQ9QYC7 757 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 CtsfQ9R013 462 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 CitP49025 2055 aa23.92■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ccdc24E9PUW8 296 aa23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 PfkmP47857 780 aaKnown RBP23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Txndc8Q69AB2 127 aa23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 March4Q80TE3 409 aa23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ddx24Q9ESV0 857 aaKnown RBP23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Krt16Q9Z2K1 469 aa23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Dock1Q8BUR4 1865 aa23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gm5485A0A1D5RM98 91 aa23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Dmp1O55188 503 aa23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Slc1a2P43006 572 aa23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Stmn1P54227 149 aaKnown RBP23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Agbl1Q09M05 972 aa23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Q8BGD0 127 aa23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Fam177a1Q8BR63 207 aa23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Klhl7Q8BUL5 586 aa23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Lrrc42Q8R2U7 421 aa23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Zcchc14Q8VIG0 956 aa23.91■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Lrrc74aA0A1Y7VMD6 494 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gm11239E9Q5Z9 360 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gm11237F2Z3W5 360 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gm11238F2Z478 360 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ptk2P34152 1090 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Lman2lP59481 347 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gm428Q3UTE2 360 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Crtc1Q68ED7 630 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Tsga10Q6NY15 697 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Uroc1Q8VC12 676 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Snx9Q91VH2 595 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ttc33Q9D6K7 262 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 ParvaQ9EPC1 372 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Rtn3Q9ES97 964 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Actn2Q9JI91 894 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Cog1Q9Z160 980 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Pck1Q9Z2V4 622 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 4930402K13RikB1AW18 415 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 D3Z070 196 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gm5160F8VPN3 147 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Grem1O70326 184 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gsdmc2Q2KHK6 480 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gsdmc4Q3TR54 480 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gstt1Q64471 240 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Olfr412Q7TRW7 312 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gsdmc3Q8CB12 480 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 MefvQ9JJ26 767 aa23.9■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ggt5Q9Z2A9 573 aa23.9■■□□□ 1.42
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms