RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W FAB1P34756 2278 aa2.9□□□□□ -1.94
ABP140YOR239W RPL26AP05743 127 aaKnown RBP2.9□□□□□ -1.94
ABP140YOR239W IMP2P46972 177 aa2.9□□□□□ -1.94
ABP140YOR239W TRS23Q03784 219 aa2.9□□□□□ -1.94
ABP140YOR239W YLR162WQ06235 118 aa2.9□□□□□ -1.94
ABP140YOR239W YGR121W-AQ3E816 71 aa2.9□□□□□ -1.94
ABP140YOR239W YAL064W-BO13512 126 aa2.9□□□□□ -1.95
ABP140YOR239W CUP1-1P0CX80 61 aa2.9□□□□□ -1.95
ABP140YOR239W CUP1-2P0CX81 61 aa2.9□□□□□ -1.95
ABP140YOR239W ATP15P21306 62 aa2.9□□□□□ -1.95
ABP140YOR239W YBL071CP38185 102 aa2.9□□□□□ -1.95
ABP140YOR239W YIL029CP40538 142 aa2.9□□□□□ -1.95
ABP140YOR239W RPC11Q04307 110 aaPredicted RBP2.9□□□□□ -1.95
ABP140YOR239W YOR381W-AQ3E804 55 aa2.9□□□□□ -1.95
ABP140YOR239W SHU1P38751 150 aa2.89□□□□□ -1.95
ABP140YOR239W YGL034CP53186 121 aa2.89□□□□□ -1.95
ABP140YOR239W LEE1Q02799 301 aaKnown RBP2.89□□□□□ -1.95
ABP140YOR239W IRC21Q04772 201 aa2.89□□□□□ -1.95
ABP140YOR239W SRL1Q08673 210 aa2.89□□□□□ -1.95
ABP140YOR239W YML100W-AQ8TGT0 57 aa2.89□□□□□ -1.95
ABP140YOR239W YGL193CP53097 103 aa2.88□□□□□ -1.95
ABP140YOR239W NCE102Q12207 173 aaRIP-Chip data2.88□□□□□ -1.95not detected
ABP140YOR239W TSC3Q3E790 80 aa2.88□□□□□ -1.95
ABP140YOR239W ARF1P11076 181 aaKnown RBP2.88□□□□□ -1.95
ABP140YOR239W HSP150P32478 413 aa2.88□□□□□ -1.95
ABP140YOR239W YEL045CP32616 141 aa2.88□□□□□ -1.95
ABP140YOR239W YHL005CP38752 130 aa2.88□□□□□ -1.95
ABP140YOR239W TVP23P38962 199 aa2.88□□□□□ -1.95
ABP140YOR239W EDC1P53080 175 aaPredicted RBP2.88□□□□□ -1.95
ABP140YOR239W TOS8P53147 276 aa2.88□□□□□ -1.95
ABP140YOR239W RPL26BP53221 127 aaKnown RBP2.88□□□□□ -1.95
ABP140YOR239W CRC1Q12289 327 aa2.88□□□□□ -1.95
ABP140YOR239W YKL065W-AQ2V2P2 73 aa2.88□□□□□ -1.95
ABP140YOR239W YDR182W-AQ3E796 67 aa2.88□□□□□ -1.95
ABP140YOR239W SPG4Q04438 115 aa2.87□□□□□ -1.95
ABP140YOR239W COX17Q12287 69 aa2.87□□□□□ -1.95
ABP140YOR239W YDR524C-BQ3E6R4 66 aa2.87□□□□□ -1.95
ABP140YOR239W YSF3P0C074 85 aaPredicted RBP2.86□□□□□ -1.95
ABP140YOR239W TDA2P40045 126 aa2.86□□□□□ -1.95
ABP140YOR239W YFL015CP43578 164 aa2.86□□□□□ -1.95
ABP140YOR239W MPC3P53311 146 aa2.86□□□□□ -1.95
ABP140YOR239W SEC16P48415 2195 aaKnown RBP2.86□□□□□ -1.95
ABP140YOR239W RPL36BO14455 100 aaKnown RBP2.86□□□□□ -1.95
ABP140YOR239W RPL36AP05745 100 aaPredicted RBP2.86□□□□□ -1.95
ABP140YOR239W KRE9P39005 276 aa2.86□□□□□ -1.95
ABP140YOR239W ARC15P40518 154 aaRIP-Chip data2.86□□□□□ -1.95 RIP-Chip
ABP140YOR239W RGM1Q00453 211 aa2.86□□□□□ -1.95
ABP140YOR239W YOL160WQ08321 113 aa2.86□□□□□ -1.95
ABP140YOR239W YGR035W-AQ45U48 73 aa2.86□□□□□ -1.95
ABP140YOR239W NOP10Q6Q547 58 aaPredicted RBP2.86□□□□□ -1.95
ABP140YOR239W BEM2P39960 2167 aaKnown RBP2.85□□□□□ -1.95
ABP140YOR239W YER188C-AP0C0V2 99 aa2.85□□□□□ -1.95
ABP140YOR239W YJR107C-AP0CT86 78 aa2.85□□□□□ -1.95
ABP140YOR239W YMR122CQ03879 124 aa2.85□□□□□ -1.95
ABP140YOR239W ACC1Q00955 2233 aaKnown RBP2.85□□□□□ -1.95
ABP140YOR239W RPL15AP05748 204 aaKnown RBP2.84□□□□□ -1.95
ABP140YOR239W QCR8P08525 94 aa2.84□□□□□ -1.95
ABP140YOR239W SPG1P50088 95 aa2.84□□□□□ -1.95
ABP140YOR239W SED1Q01589 338 aa2.84□□□□□ -1.95
ABP140YOR239W YOL166W-AQ8TGJ1 51 aa2.84□□□□□ -1.95
ABP140YOR239W OST5Q92316 86 aa2.84□□□□□ -1.95
ABP140YOR239W TEL1P38110 2787 aa2.84□□□□□ -1.96
ABP140YOR239W YLR236CA0A023PZG4 107 aa2.84□□□□□ -1.96
ABP140YOR239W YJR146WP47174 117 aa2.84□□□□□ -1.96
ABP140YOR239W FAS1P07149 2051 aaKnown RBP2.83□□□□□ -1.96
ABP140YOR239W RPS27AP35997 82 aaKnown RBP2.83□□□□□ -1.96
ABP140YOR239W RPS27BP38711 82 aa2.83□□□□□ -1.96
ABP140YOR239W REE1P40893 198 aa2.83□□□□□ -1.96
ABP140YOR239W YGL088WP53151 121 aa2.83□□□□□ -1.96
ABP140YOR239W YOR034C-AQ3E735 80 aa2.83□□□□□ -1.96
ABP140YOR239W YAL064WP39711 94 aa2.82□□□□□ -1.96
ABP140YOR239W YJL027CP47063 138 aaPredicted RBP2.82□□□□□ -1.96
ABP140YOR239W POL2P21951 2222 aaKnown RBP2.82□□□□□ -1.96
ABP140YOR239W RPS30AP0CX33 63 aaKnown RBP2.81□□□□□ -1.96
ABP140YOR239W RPS30BP0CX34 63 aaKnown RBP2.81□□□□□ -1.96
ABP140YOR239W RRT1P38192 103 aa2.81□□□□□ -1.96
ABP140YOR239W YHL037CP38733 133 aa2.81□□□□□ -1.96
ABP140YOR239W YIR020CP40575 100 aa2.81□□□□□ -1.96
ABP140YOR239W YPR153WQ06537 140 aa2.81□□□□□ -1.96
ABP140YOR239W RNH203Q12338 110 aa2.81□□□□□ -1.96
ABP140YOR239W YOR020W-AQ3E824 90 aa2.81□□□□□ -1.96
ABP140YOR239W BRR2P32639 2163 aaKnown RBP2.81□□□□□ -1.96
ABP140YOR239W SEN1Q00416 2231 aaKnown RBP2.81□□□□□ -1.96
ABP140YOR239W IRA2P19158 3079 aa2.8□□□□□ -1.96
ABP140YOR239W RPS23AP0CX29 145 aaKnown RBP2.8□□□□□ -1.96
ABP140YOR239W RPS23BP0CX30 145 aa2.8□□□□□ -1.96
ABP140YOR239W YER135CP40082 130 aa2.8□□□□□ -1.96
ABP140YOR239W ATP18P81450 59 aa2.8□□□□□ -1.96
ABP140YOR239W DDR48P18899 430 aaKnown RBP2.79□□□□□ -1.96
ABP140YOR239W FYV5P25585 152 aa2.79□□□□□ -1.96
ABP140YOR239W RPL38P49167 78 aaKnown RBP2.79□□□□□ -1.96
ABP140YOR239W YMR244WQ04018 355 aa2.79□□□□□ -1.96
ABP140YOR239W BPH1P25356 2167 aa2.79□□□□□ -1.96
ABP140YOR239W UTH1P36135 365 aa2.78□□□□□ -1.96
ABP140YOR239W YPS5P53057 165 aa2.78□□□□□ -1.96
ABP140YOR239W YDR114CQ04597 100 aa2.77□□□□□ -1.97
ABP140YOR239W YFR009W-AP0C5M9 85 aa2.77□□□□□ -1.97
ABP140YOR239W HOT13P36078 116 aa2.77□□□□□ -1.97
ABP140YOR239W YEL008WP40001 126 aa2.77□□□□□ -1.97
ABP140YOR239W RPR2P40571 144 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 44.4 ms