RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W NHP2P32495 156 aaPredicted RBP-0.06□□□□□ -2.42
BFR2YDR299W LHP1P33399 275 aaKnown RBP-0.06□□□□□ -2.42
BFR2YDR299W YGR025WP53216 100 aa-0.06□□□□□ -2.42
BFR2YDR299W RSM19P53733 91 aaPredicted RBP-0.07□□□□□ -2.42
BFR2YDR299W SDH6Q3E785 79 aa-0.07□□□□□ -2.42
BFR2YDR299W YKL068W-AQ3E826 78 aa-0.07□□□□□ -2.42
BFR2YDR299W MHF2Q3E829 80 aa-0.07□□□□□ -2.42
BFR2YDR299W DNF3Q12674 1656 aa-0.07□□□□□ -2.42
BFR2YDR299W TY1B-DR6P0C2I3 1755 aa-0.07□□□□□ -2.42
BFR2YDR299W TY1B-LR2P0C2I5 1755 aa-0.07□□□□□ -2.42
BFR2YDR299W TY1B-JR2P47100 1755 aaKnown RBP-0.07□□□□□ -2.42
BFR2YDR299W TY1B-MR1Q04214 1755 aa-0.07□□□□□ -2.42
BFR2YDR299W TY1B-MR2Q04670 1755 aaKnown RBP-0.07□□□□□ -2.42
BFR2YDR299W TY1B-NL1Q12112 1755 aa-0.07□□□□□ -2.42
BFR2YDR299W TY1B-GR1Q12141 1755 aa-0.07□□□□□ -2.42
BFR2YDR299W TY1B-GR3Q12316 1755 aa-0.07□□□□□ -2.42
BFR2YDR299W TY1B-PLQ12414 1755 aaKnown RBP-0.07□□□□□ -2.42
BFR2YDR299W TY1B-ORQ92393 1755 aa-0.07□□□□□ -2.42
BFR2YDR299W GEA2P39993 1459 aaKnown RBP-0.07□□□□□ -2.42
BFR2YDR299W MOT1P32333 1867 aa-0.07□□□□□ -2.42
BFR2YDR299W SEN1Q00416 2231 aaKnown RBP-0.08□□□□□ -2.42
BFR2YDR299W YBR090CP38253 122 aa-0.08□□□□□ -2.42
BFR2YDR299W SPC1P46965 94 aa-0.08□□□□□ -2.42
BFR2YDR299W BSC4P53841 131 aa-0.08□□□□□ -2.42
BFR2YDR299W YBR201C-AQ2V2Q3 67 aa-0.08□□□□□ -2.42
BFR2YDR299W YCR108CQ3E819 63 aa-0.08□□□□□ -2.42
BFR2YDR299W REV3P14284 1504 aa-0.08□□□□□ -2.42
BFR2YDR299W TSC11P40061 1430 aa-0.08□□□□□ -2.42
BFR2YDR299W PDR11P40550 1411 aa-0.08□□□□□ -2.42
BFR2YDR299W PMD1P32634 1753 aa-0.08□□□□□ -2.42
BFR2YDR299W ECM12O13529 151 aa-0.09□□□□□ -2.42
BFR2YDR299W HMRA1P0CY11 126 aa-0.09□□□□□ -2.42
BFR2YDR299W NHP10Q03435 203 aa-0.09□□□□□ -2.42
BFR2YDR299W YDR029WQ12111 104 aa-0.09□□□□□ -2.42
BFR2YDR299W YDR246W-AQ3E763 66 aa-0.09□□□□□ -2.42
BFR2YDR299W YER137CP40083 148 aaKnown RBP-0.09□□□□□ -2.42
BFR2YDR299W ATP18P81450 59 aa-0.09□□□□□ -2.42
BFR2YDR299W YOR289WQ12012 251 aaPredicted RBP-0.09□□□□□ -2.42
BFR2YDR299W SUS1Q6WNK7 96 aa-0.09□□□□□ -2.42
BFR2YDR299W BPH1P25356 2167 aa-0.1□□□□□ -2.42
BFR2YDR299W RPA190P10964 1664 aaKnown RBP-0.1□□□□□ -2.43
BFR2YDR299W EDC1P53080 175 aaPredicted RBP-0.1□□□□□ -2.43
BFR2YDR299W TY1B-DR5P0C2I2 1755 aa-0.11□□□□□ -2.43
BFR2YDR299W TY1B-PR1P0C2I9 1755 aaKnown RBP-0.11□□□□□ -2.43
BFR2YDR299W TY1B-JR1P47098 1755 aa-0.11□□□□□ -2.43
BFR2YDR299W TY1B-ML2Q03434 1755 aaKnown RBP-0.11□□□□□ -2.43
BFR2YDR299W TY1B-ER1Q03612 1755 aa-0.11□□□□□ -2.43
BFR2YDR299W TY1B-ER2Q03619 1755 aa-0.11□□□□□ -2.43
BFR2YDR299W TY1B-DR1Q03855 1755 aa-0.11□□□□□ -2.43
BFR2YDR299W TY1B-ML1Q04711 1755 aaKnown RBP-0.11□□□□□ -2.43
BFR2YDR299W TY1B-LR1Q12088 1755 aaKnown RBP-0.11□□□□□ -2.43
BFR2YDR299W TY1B-GR2Q12269 1755 aa-0.11□□□□□ -2.43
BFR2YDR299W TY1B-OLQ12273 1755 aa-0.11□□□□□ -2.43
BFR2YDR299W TY1B-DR3Q99231 1755 aa-0.11□□□□□ -2.43
BFR2YDR299W YCR085WP25650 117 aa-0.11□□□□□ -2.43
BFR2YDR299W YBR032WP38223 100 aa-0.11□□□□□ -2.43
BFR2YDR299W MSL1P40567 111 aaPredicted RBP-0.11□□□□□ -2.43
BFR2YDR299W ECM29P38737 1868 aa-0.11□□□□□ -2.43
BFR2YDR299W YAL065CO13511 128 aa-0.12□□□□□ -2.43
BFR2YDR299W FPR2P32472 135 aa-0.12□□□□□ -2.43
BFR2YDR299W YOL097W-AQ3E7Y9 61 aa-0.12□□□□□ -2.43
BFR2YDR299W KSH1Q8TGJ3 72 aa-0.12□□□□□ -2.43
BFR2YDR299W STT4P37297 1900 aa-0.12□□□□□ -2.43
BFR2YDR299W RPS29AP41057 56 aaKnown RBP-0.13□□□□□ -2.43
BFR2YDR299W FYV7Q12247 151 aa-0.13□□□□□ -2.43
BFR2YDR299W YPR108W-AQ3E7B3 70 aa-0.13□□□□□ -2.43
BFR2YDR299W YMR122W-AQ3E842 84 aa-0.13□□□□□ -2.43
BFR2YDR299W MMS1Q06211 1407 aa-0.13□□□□□ -2.43
BFR2YDR299W YMR001C-AQ8TGS9 76 aa-0.13□□□□□ -2.43
BFR2YDR299W ZEO1Q08245 113 aa-0.14□□□□□ -2.43
BFR2YDR299W APC1P53886 1748 aa-0.15□□□□□ -2.43
BFR2YDR299W SWR1Q05471 1514 aa-0.15□□□□□ -2.43
BFR2YDR299W YBL044WP38194 122 aa-0.16□□□□□ -2.43
BFR2YDR299W PAU23Q07987 124 aa-0.16□□□□□ -2.43
BFR2YDR299W PAU17Q12370 124 aa-0.16□□□□□ -2.43
BFR2YDR299W YCL001W-BQ96VH2 84 aa-0.16□□□□□ -2.43
BFR2YDR299W YPL225WQ08971 146 aaKnown RBP-0.16□□□□□ -2.44
BFR2YDR299W YOR008C-AQ3E7B9 74 aa-0.16□□□□□ -2.44
BFR2YDR299W RRT15Q3E811 62 aa-0.16□□□□□ -2.44
BFR2YDR299W TOR1P35169 2470 aa-0.17□□□□□ -2.44
BFR2YDR299W XRN1P22147 1528 aaKnown RBP-0.17□□□□□ -2.44
BFR2YDR299W GDB1Q06625 1536 aa-0.17□□□□□ -2.44
BFR2YDR299W YDR042CQ03205 200 aa-0.17□□□□□ -2.44
BFR2YDR299W SCP1Q08873 200 aa-0.17□□□□□ -2.44
BFR2YDR299W YKL018C-AQ3E7A7 99 aa-0.18□□□□□ -2.44
BFR2YDR299W POL1P13382 1468 aa-0.18□□□□□ -2.44
BFR2YDR299W UTP10P42945 1769 aaKnown RBP-0.19□□□□□ -2.44
BFR2YDR299W OLI1P61829 76 aa-0.19□□□□□ -2.44
BFR2YDR299W YOR105WQ08504 108 aa-0.19□□□□□ -2.44
BFR2YDR299W TY1B-NL2Q99337 1749 aaKnown RBP-0.19□□□□□ -2.44
BFR2YDR299W YOR343CQ12484 108 aa-0.2□□□□□ -2.44
BFR2YDR299W YDR182W-AQ3E796 67 aa-0.2□□□□□ -2.44
BFR2YDR299W SIP18P50263 79 aa-0.2□□□□□ -2.44
BFR2YDR299W YKL065W-AQ2V2P2 73 aa-0.2□□□□□ -2.44
BFR2YDR299W NOP10Q6Q547 58 aaPredicted RBP-0.2□□□□□ -2.44
BFR2YDR299W LSM2P38203 95 aaKnown RBP-0.21□□□□□ -2.44
BFR2YDR299W KOG1P38873 1557 aa-0.22□□□□□ -2.44
BFR2YDR299W SMC4Q12267 1418 aa-0.22□□□□□ -2.44
BFR2YDR299W PDR10P51533 1564 aa-0.22□□□□□ -2.45
BFR2YDR299W TY2B-LR1P0C2J3 1770 aa-0.23□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms