RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C YNL042W-BQ3E7Z2 85 aa0.83□□□□□ -2.28
SHU2YDR078C YCR075W-AQ3E830 75 aa0.83□□□□□ -2.28
SHU2YDR078C RPA190P10964 1664 aaKnown RBP0.82□□□□□ -2.28
SHU2YDR078C PEP1P32319 1579 aa0.82□□□□□ -2.28
SHU2YDR078C NHP2P32495 156 aaPredicted RBP0.81□□□□□ -2.28
SHU2YDR078C BSC4P53841 131 aa0.81□□□□□ -2.28
SHU2YDR078C YCL001W-BQ96VH2 84 aa0.81□□□□□ -2.28
SHU2YDR078C Q0032Q9ZZX7 96 aa0.81□□□□□ -2.28
SHU2YDR078C DNF1P32660 1571 aa0.81□□□□□ -2.28
SHU2YDR078C MYO1P08964 1928 aa0.81□□□□□ -2.28
SHU2YDR078C RPO31P04051 1460 aa0.8□□□□□ -2.28
SHU2YDR078C YCF1P39109 1515 aaKnown RBP0.8□□□□□ -2.28
SHU2YDR078C TCB3Q03640 1545 aaKnown RBP0.8□□□□□ -2.28
SHU2YDR078C CDC25P04821 1589 aa0.8□□□□□ -2.28
SHU2YDR078C SSK2P53599 1579 aa0.8□□□□□ -2.28
SHU2YDR078C RPL38P49167 78 aaKnown RBP0.8□□□□□ -2.28
SHU2YDR078C RIM15P43565 1770 aa0.8□□□□□ -2.28
SHU2YDR078C LTE1P07866 1435 aa0.8□□□□□ -2.28
SHU2YDR078C THO2P53552 1597 aaKnown RBP0.79□□□□□ -2.28
SHU2YDR078C HIR3P47171 1648 aa0.79□□□□□ -2.28
SHU2YDR078C YOR093CQ12275 1648 aa0.79□□□□□ -2.28
SHU2YDR078C MMS1Q06211 1407 aa0.79□□□□□ -2.28
SHU2YDR078C POL1P13382 1468 aa0.79□□□□□ -2.28
SHU2YDR078C DNF2Q12675 1612 aa0.78□□□□□ -2.28
SHU2YDR078C FAS2P19097 1887 aaKnown RBP0.78□□□□□ -2.28
SHU2YDR078C YJR107C-AP0CT86 78 aa0.78□□□□□ -2.28
SHU2YDR078C COX7P10174 60 aa0.78□□□□□ -2.28
SHU2YDR078C YBR201C-AQ2V2Q3 67 aa0.78□□□□□ -2.28
SHU2YDR078C SPT6P23615 1451 aaKnown RBP0.78□□□□□ -2.28
SHU2YDR078C PDR10P51533 1564 aa0.78□□□□□ -2.29
SHU2YDR078C ECM12O13529 151 aa0.77□□□□□ -2.29
SHU2YDR078C PDR15Q04182 1529 aaKnown RBP0.77□□□□□ -2.29
SHU2YDR078C GDB1Q06625 1536 aa0.77□□□□□ -2.29
SHU2YDR078C YRF1-2P40105 1681 aa0.77□□□□□ -2.29
SHU2YDR078C ESC1Q03661 1658 aaKnown RBP0.76□□□□□ -2.29
SHU2YDR078C ATG2P53855 1592 aa0.76□□□□□ -2.29
SHU2YDR078C SIN3P22579 1536 aa0.76□□□□□ -2.29
SHU2YDR078C PDX3P38075 228 aaKnown RBP0.76□□□□□ -2.29
SHU2YDR078C YMR082CQ04276 118 aa0.75□□□□□ -2.29
SHU2YDR078C SCP1Q08873 200 aa0.75□□□□□ -2.29
SHU2YDR078C RKR1Q04781 1562 aa0.74□□□□□ -2.29
SHU2YDR078C TY1B-BLQ12490 1755 aa0.74□□□□□ -2.29
SHU2YDR078C YHR214C-DP0CX93 97 aa0.73□□□□□ -2.29
SHU2YDR078C YFR009W-AP0C5M9 85 aa0.72□□□□□ -2.29
SHU2YDR078C VPS15P22219 1454 aa0.72□□□□□ -2.29
SHU2YDR078C FPR2P32472 135 aa0.71□□□□□ -2.3
SHU2YDR078C TOM6P33448 61 aa0.71□□□□□ -2.3
SHU2YDR078C ATX1P38636 73 aa0.71□□□□□ -2.3
SHU2YDR078C YMR122W-AQ3E842 84 aa0.71□□□□□ -2.3
SHU2YDR078C YBR016WP38216 128 aa0.7□□□□□ -2.3
SHU2YDR078C YGL194C-AQ2V2P6 80 aa0.7□□□□□ -2.3
SHU2YDR078C DOP1Q03921 1698 aa0.69□□□□□ -2.3
SHU2YDR078C YAL065CO13511 128 aa0.69□□□□□ -2.3
SHU2YDR078C XRN1P22147 1528 aaKnown RBP0.69□□□□□ -2.3
SHU2YDR078C UFD4P33202 1483 aa0.68□□□□□ -2.3
SHU2YDR078C ARO1P08566 1588 aaKnown RBP0.68□□□□□ -2.3
SHU2YDR078C PAU23Q07987 124 aa0.68□□□□□ -2.3
SHU2YDR078C PAU17Q12370 124 aa0.68□□□□□ -2.3
SHU2YDR078C YIL134C-AQ45U18 67 aa0.68□□□□□ -2.3
SHU2YDR078C DNF3Q12674 1656 aa0.68□□□□□ -2.3
SHU2YDR078C SCC2Q04002 1493 aa0.67□□□□□ -2.3
SHU2YDR078C TOM1Q03280 3268 aa0.67□□□□□ -2.3
SHU2YDR078C SKI3P17883 1432 aaKnown RBP0.67□□□□□ -2.3
SHU2YDR078C SPO14P36126 1683 aa0.67□□□□□ -2.3
SHU2YDR078C NUP170P38181 1502 aa0.67□□□□□ -2.3
SHU2YDR078C TY1B-BRQ12193 1756 aa0.67□□□□□ -2.3
SHU2YDR078C TY1B-GR3Q12316 1755 aa0.67□□□□□ -2.3
SHU2YDR078C TY1B-ORQ92393 1755 aa0.67□□□□□ -2.3
SHU2YDR078C NUP159P40477 1460 aa0.67□□□□□ -2.3
SHU2YDR078C TAO3P40468 2376 aa0.65□□□□□ -2.3
SHU2YDR078C TY2B-LR1P0C2J3 1770 aa0.65□□□□□ -2.3
SHU2YDR078C TY2B-FP0CX63 1770 aa0.65□□□□□ -2.3
SHU2YDR078C TY2B-GR2P0CX64 1770 aa0.65□□□□□ -2.3
SHU2YDR078C TY2B-CP25384 1770 aa0.65□□□□□ -2.3
SHU2YDR078C TY2B-DR2Q03494 1770 aa0.65□□□□□ -2.3
SHU2YDR078C TY1B-DR1Q03855 1755 aa0.65□□□□□ -2.3
SHU2YDR078C TY2B-DR3Q07791 1770 aaKnown RBP0.65□□□□□ -2.3
SHU2YDR078C TY2B-OR1Q12113 1770 aa0.65□□□□□ -2.3
SHU2YDR078C TY2B-DR1Q12472 1770 aa0.65□□□□□ -2.3
SHU2YDR078C TY2B-OR2Q12501 1770 aa0.65□□□□□ -2.3
SHU2YDR078C ESP1Q03018 1630 aa0.65□□□□□ -2.31
SHU2YDR078C ULS1Q08562 1619 aa0.65□□□□□ -2.31
SHU2YDR078C ATP18P81450 59 aa0.65□□□□□ -2.31
SHU2YDR078C YMR175W-AQ3E766 64 aa0.65□□□□□ -2.31
SHU2YDR078C YSP2Q06681 1438 aa0.64□□□□□ -2.31
SHU2YDR078C BCK1Q01389 1478 aa0.64□□□□□ -2.31
SHU2YDR078C TY1B-DR5P0C2I2 1755 aa0.64□□□□□ -2.31
SHU2YDR078C TY1B-DR6P0C2I3 1755 aa0.64□□□□□ -2.31
SHU2YDR078C TY1B-LR2P0C2I5 1755 aa0.64□□□□□ -2.31
SHU2YDR078C TY1B-LR3P0C2I6 1755 aaKnown RBP0.64□□□□□ -2.31
SHU2YDR078C TY1B-PR1P0C2I9 1755 aaKnown RBP0.64□□□□□ -2.31
SHU2YDR078C TY1B-PR2P0C2J0 1756 aa0.64□□□□□ -2.31
SHU2YDR078C TY1B-PR3P0C2J1 1755 aaKnown RBP0.64□□□□□ -2.31
SHU2YDR078C TY1B-JR1P47098 1755 aa0.64□□□□□ -2.31
SHU2YDR078C TY1B-ML2Q03434 1755 aaKnown RBP0.64□□□□□ -2.31
SHU2YDR078C TY1B-ER1Q03612 1755 aa0.64□□□□□ -2.31
SHU2YDR078C TY1B-ML1Q04711 1755 aaKnown RBP0.64□□□□□ -2.31
SHU2YDR078C TY1B-GR2Q12269 1755 aa0.64□□□□□ -2.31
SHU2YDR078C TY1B-OLQ12273 1755 aa0.64□□□□□ -2.31
SHU2YDR078C TY1B-PLQ12414 1755 aaKnown RBP0.64□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms