RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 WDR44Q5JSH3 913 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 DENND4CQ5VZ89 1909 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 ANKRD40Q6AI12 368 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 PAQR9Q6ZVX9 377 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 ZC3H3Q8IXZ2 948 aaKnown RBP19.38■□□□□ 0.69
CLN6-210ENST00000635747 FUKQ8N0W3 1084 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 CPA6Q8N4T0 437 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 SH3RF2Q8TEC5 729 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 OSCP1Q8WVF1 389 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 ATP2A3Q93084 1043 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 EEF2KMTQ96G04 330 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 KCNK16Q96T55 309 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 EBF3Q9H4W6 596 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 APOBEC3GQ9HC16 384 aaKnown RBP19.38■□□□□ 0.69
CLN6-210ENST00000635747 HPS4Q9NQG7 708 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 TMEM30AQ9NV96 361 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 RAB20Q9NX57 234 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 DUS2Q9NX74 493 aaKnown RBP19.38■□□□□ 0.69
CLN6-210ENST00000635747 CACNA1IQ9P0X4 2223 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 PCDHGA2Q9Y5H1 932 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 DMDP11532 3685 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 CFAP54Q96N23 3096 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 WDR87Q6ZQQ6 2873 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 PON2Q15165 354 aa19.37■□□□□ 0.69
CLN6-210ENST00000635747 TCERG1LQ5VWI1 586 aa19.37■□□□□ 0.69
CLN6-210ENST00000635747 TXNDC11Q6PKC3 985 aa19.37■□□□□ 0.69
CLN6-210ENST00000635747 DDX42Q86XP3 938 aaKnown RBP eCLIP19.37■□□□□ 0.69
CLN6-210ENST00000635747 SPEM1Q8N4L4 309 aa19.37■□□□□ 0.69
CLN6-210ENST00000635747 SLC2A14Q8TDB8 520 aa19.37■□□□□ 0.69
CLN6-210ENST00000635747 ATRIPQ8WXE1 791 aa19.37■□□□□ 0.69
CLN6-210ENST00000635747 ERCC4Q92889 916 aaPredicted RBP19.37■□□□□ 0.69
CLN6-210ENST00000635747 FBXO32Q969P5 355 aa19.37■□□□□ 0.69
CLN6-210ENST00000635747 HNRNPABQ99729 332 aaKnown RBP19.37■□□□□ 0.69
CLN6-210ENST00000635747 FBXO44Q9H4M3 255 aa19.37■□□□□ 0.69
CLN6-210ENST00000635747 METTL14Q9HCE5 456 aaKnown RBP19.37■□□□□ 0.69
CLN6-210ENST00000635747 CSNK1G1Q9HCP0 422 aa19.37■□□□□ 0.69
CLN6-210ENST00000635747 KRT82Q9NSB4 513 aa19.37■□□□□ 0.69
CLN6-210ENST00000635747 ZSCAN32Q9NX65 697 aa19.37■□□□□ 0.69
CLN6-210ENST00000635747 IL37Q9NZH6 218 aa19.37■□□□□ 0.69
CLN6-210ENST00000635747 ARMCX3Q9UH62 379 aaPredicted RBP19.37■□□□□ 0.69
CLN6-210ENST00000635747 R4GN57 208 aa19.37■□□□□ 0.69
CLN6-210ENST00000635747 FRYLO94915 3013 aa19.37■□□□□ 0.69
CLN6-210ENST00000635747 PTPRDP23468 1912 aa19.36■□□□□ 0.69
CLN6-210ENST00000635747 TNFRSF10BO14763 440 aa19.36■□□□□ 0.69
CLN6-210ENST00000635747 FAM200BP0CF97 657 aa19.36■□□□□ 0.69
CLN6-210ENST00000635747 CXCL12P48061 93 aa19.36■□□□□ 0.69
CLN6-210ENST00000635747 SLC5A3P53794 718 aa19.36■□□□□ 0.69
CLN6-210ENST00000635747 GRSF1Q12849 480 aaKnown RBP eCLIP19.36■□□□□ 0.69
CLN6-210ENST00000635747 IFRD2Q12894 506 aaPredicted RBP19.36■□□□□ 0.69
CLN6-210ENST00000635747 SNX30Q5VWJ9 437 aa19.36■□□□□ 0.69
CLN6-210ENST00000635747 TRIM68Q6AZZ1 485 aa19.36■□□□□ 0.69
CLN6-210ENST00000635747 TTC16Q8NEE8 873 aa19.36■□□□□ 0.69
CLN6-210ENST00000635747 CYFIP2Q96F07 1278 aa19.36■□□□□ 0.69
CLN6-210ENST00000635747 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.36■□□□□ 0.695e-7■■■■■ 90.8
CLN6-210ENST00000635747 MAN1B1Q9UKM7 699 aa19.36■□□□□ 0.69
CLN6-210ENST00000635747 FAM92AA1XBS5 289 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 TRDMT1O14717 391 aaKnown RBP19.35■□□□□ 0.69
CLN6-210ENST00000635747 SLC9A3R1O14745 358 aaPredicted RBP19.35■□□□□ 0.69
CLN6-210ENST00000635747 CILPO75339 1184 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 OLFM2O95897 454 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 OAS1P00973 400 aaKnown RBP19.35■□□□□ 0.69
CLN6-210ENST00000635747 CCDC130P13994 396 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 ARSAP15289 507 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 CCINQ13939 588 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 DCAF17Q5H9S7 520 aaPredicted RBP19.35■□□□□ 0.69
CLN6-210ENST00000635747 FOXR2Q6PJQ5 311 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 FILIP1Q7Z7B0 1213 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 C12orf29Q8N999 325 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 ZBTB44Q8NCP5 570 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 RIN3Q8TB24 985 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 NELL1Q92832 810 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 CEP63Q96MT8 703 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 ECT2Q9H8V3 914 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 PNPLA8Q9NP80 782 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 CHMP5Q9NZZ3 219 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 HMGXB4Q9UGU5 601 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 COQ4Q9Y3A0 265 aa19.35■□□□□ 0.69
CLN6-210ENST00000635747 ZNF638Q14966 1978 aaKnown RBP19.34■□□□□ 0.69
CLN6-210ENST00000635747 GREB1Q4ZG55 1949 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 BICDL2A1A5D9 508 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 LEFTY2O00292 366 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 NFATC1O95644 943 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 CD58P19256 250 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 DRD1P21728 446 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 TUBP50607 506 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 PMS1P54277 932 aaKnown RBP19.34■□□□□ 0.69
CLN6-210ENST00000635747 MAP3K7CLP57077 242 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 ORC1Q13415 861 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 EML3Q32P44 896 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 TMEM196Q5HYL7 178 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 HECTD3Q5T447 861 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 SCAMP5Q8TAC9 235 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 SEMA4DQ92854 862 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 SMOQ99835 787 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 RNF38Q9H0F5 515 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 FAM49BQ9NUQ9 324 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 CPQQ9Y646 472 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 WNT6Q9Y6F9 365 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 OBSL1O75147 1896 aa19.34■□□□□ 0.69
CLN6-210ENST00000635747 PTPRZ1P23471 2315 aaPredicted RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms