RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 PLA2G4FQ68DD2 849 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 AGAP11Q8TF27 550 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 USP6NLQ92738 828 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 TNFRSF25Q93038 417 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DGCR14Q96DF8 476 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 PPP1R10Q96QC0 940 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 MMP19Q99542 508 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ARPC5LQ9BPX5 153 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 LRRC40Q9H9A6 602 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DTNAQ9Y4J8 743 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 UNC13CQ8NB66 2214 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ANKRD33BA6NCL7 494 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CLASP2O75122 1294 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 PYGMP11217 842 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CNTFP26441 200 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 LRRC36Q1X8D7 754 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 C10orf62Q5T681 223 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 IRGCQ6NXR0 463 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CKAP2Q8WWK9 683 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 JMJD4Q9H9V9 463 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ZNF556Q9HAH1 456 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PCDHGB4Q9UN71 923 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 A0A0B4J269 797 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CCDC85CA6NKD9 419 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SMIM22K7EJ46 135 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 WNT7AO00755 349 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 KLHL41O60662 606 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 LCP1P13796 627 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 NSUN2Q08J23 767 aaKnown RBP eCLIP3.16□□□□□ -1.9
LPP-221ENST00000618621 TUBB3Q13509 450 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ZC2HC1CQ53FD0 456 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 ZBTB49Q6ZSB9 765 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 REEP2Q9BRK0 252 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 C1orf50Q9BV19 199 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CATSPERBQ9H7T0 1116 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.16□□□□□ -1.9
LPP-221ENST00000618621 RAD54BQ9Y620 910 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CAPN6Q9Y6Q1 641 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 MYO3BQ8WXR4 1341 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 TRIM49D1C9J1S8 452 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CYTH3O43739 400 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SNX3O60493 162 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 MPOP05164 745 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 POLBP06746 335 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PTGER2P43116 358 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ROR2Q01974 943 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 CSTF3Q12996 717 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 ACAP1Q15027 740 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 RASA2Q15283 850 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CDO1Q16878 200 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 WDR72Q3MJ13 1102 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CACTIN-AS1Q8N1I8 211 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CHCHD4Q8N4Q1 142 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 MRIQ9BWK5 157 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 NRDE2Q9H7Z3 1164 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 EFCAB1Q9HAE3 211 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 KIF17Q9P2E2 1029 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 HAO1Q9UJM8 370 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ANGPT2O15123 496 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 FAM200BP0CF97 657 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SREBF1P36956 1147 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 XIAPP98170 497 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DDR1Q08345 913 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 RCN1Q15293 331 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 TRIM60Q495X7 471 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 TTC27Q6P3X3 843 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PRELID2Q8N945 189 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PAIP1Q9H074 479 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 ADNPQ9H2P0 1102 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PCDHGC5Q9Y5F6 944 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 A0A087WXM4 84 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 XPO1O14980 1071 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 FKBP6O75344 327 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 FKBP9O95302 570 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PNPLA4P41247 253 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DAB2P98082 770 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PLEKHG6Q3KR16 790 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PRMT9Q6P2P2 845 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 FKBP9P1Q75LS8 142 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 OTOP1Q7RTM1 612 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ANKMY2Q8IV38 441 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PSMA8Q8TAA3 256 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 URGCPQ8TCY9 931 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 NCLNQ969V3 563 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 TMEM109Q9BVC6 243 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 FAM49AQ9H0Q0 323 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 CTNNAL1Q9UBT7 734 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 FIS1Q9Y3D6 152 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SPDYE2BA6NHP3 402 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PIK3CDO00329 1044 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SPDYE6P0CI01 402 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SLURP2P0DP57 97 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SLC2A3P11169 496 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ABL2P42684 1182 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 RAD51Q06609 339 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 LMBRD2Q68DH5 695 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 TAF2Q6P1X5 1199 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CCDC80Q76M96 950 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SHCBP1Q8NEM2 672 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms