RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 GABBR2O75899 941 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 PAPLNO95428 1278 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 LSM8O95777 96 aaKnown RBP16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 CYP1A1P04798 512 aaPredicted RBP16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 HMGA1P17096 107 aaKnown RBP16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 PTPN2P17706 415 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 KCNA5P22460 613 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 CDH5P33151 784 aaPredicted RBP16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 EIF4A3P38919 411 aaKnown RBP16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 CCDC186Q7Z3E2 898 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 GRASPQ7Z6J2 395 aaPredicted RBP16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 STK32AQ8WU08 396 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 KCTD13Q8WZ19 329 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 HLA-CQ95604 372 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 HSFY1Q96LI6 401 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 NOX5Q96PH1 765 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 PANX2Q96RD6 677 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 SLC4A5Q9BY07 1137 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 ADAM7Q9H2U9 754 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 CD207Q9UJ71 328 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 CDH22Q9UJ99 828 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 TRANK1O15050 2925 aa16.47■□□□□ 0.23
PCDHGC3-204ENST00000617222 DDX3XO00571 662 aaKnown RBP eCLIP16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 RTN3O95197 1032 aaPredicted RBP16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 LCP1P13796 627 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 YWHAQP27348 245 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 TKTL1P51854 596 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 KIF11P52732 1056 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 NOMO3P69849 1222 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 NTHL1P78549 312 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 ITIH3Q06033 890 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 PDCLQ13371 301 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 CLEC16AQ2KHT3 1053 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 RAB41Q5JT25 222 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 ATAT1Q5SQI0 421 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 CES5AQ6NT32 575 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 CYP26C1Q6V0L0 522 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 VPS36Q86VN1 386 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 SLC30A5Q8TAD4 765 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 OLIG1Q8TAK6 271 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 PPP1R13BQ96KQ4 1090 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 LRRC3Q9BY71 257 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 ZNF334Q9HCZ1 680 aaPredicted RBP16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 COMMD8Q9NX08 183 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 IL37Q9NZH6 218 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 ADAMTS1Q9UHI8 967 aa16.46■□□□□ 0.23
PCDHGC3-204ENST00000617222 SZT2Q5T011 3432 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 RHOP08100 348 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 MYL4P12829 197 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 UNGP13051 313 aaPredicted RBP16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 ACADSBP45954 432 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 RPL34P49207 117 aaKnown RBP16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 GSDMDP57764 484 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 CDK17Q00537 523 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 ADIGQ0VDE8 80 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 TAF10Q12962 218 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 CYP4A22Q5TCH4 519 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 TMEM110Q86TL2 294 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 ERICH1Q86X53 443 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 TMC8Q8IU68 726 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 SIX6OS1Q8N1H7 587 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 FBXO32Q969P5 355 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 MYRFLQ96LU7 910 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 CPXM1Q96SM3 734 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 TTLL2Q9BWV7 592 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 MIS12Q9H081 205 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 FBXO44Q9H4M3 255 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 NHEJ1Q9H9Q4 299 aaPredicted RBP16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 ASAH2Q9NR71 780 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 TAS2R14Q9NYV8 317 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 EHD2Q9NZN4 543 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 UXTQ9UBK9 157 aaPredicted RBP16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 TJP2Q9UDY2 1190 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 USP3Q9Y6I4 520 aa16.45■□□□□ 0.22
PCDHGC3-204ENST00000617222 SSU72P8A0A1W2PR75 194 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 TMCO5BA8MYB1 307 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 E5RJQ4 531 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 USP17L7P0C7H9 530 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 GABRR2P28476 465 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 PTPN20Q4JDL3 420 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 PABPC1LQ4VXU2 614 aaKnown RBP16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 ACAD10Q6JQN1 1059 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 PDZD4Q76G19 769 aaPredicted RBP16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 SCUBE3Q8IX30 993 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 NDRG1Q92597 394 aaKnown RBP16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 TRMT2BQ96GJ1 504 aaKnown RBP16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 ULBP1Q9BZM6 244 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 DEF6Q9H4E7 631 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 SYNCQ9H7C4 482 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 IL21Q9HBE4 155 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 CYLDQ9NQC7 956 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 PRDM6Q9NQX0 595 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 CHORDC1Q9UHD1 332 aaPredicted RBP16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 COG5Q9UP83 839 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 SCML2Q9UQR0 700 aa16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 MTCL1Q9Y4B5 1905 aaKnown RBP16.44■□□□□ 0.22
PCDHGC3-204ENST00000617222 A0A087X0T9 212 aa16.43■□□□□ 0.22
PCDHGC3-204ENST00000617222 FAM92AA1XBS5 289 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms