RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 PDIA4P13667 645 aaKnown RBP7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 FDPSP14324 419 aaKnown RBP7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TCF3P15923 654 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CR2P20023 1033 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ACTN2P35609 894 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 YARSP54577 528 aaKnown RBP7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 OSTNP61366 133 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CUL4AQ13619 759 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TRIM29Q14134 588 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SUZ12Q15022 739 aaKnown RBP7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TBC1D25Q3MII6 688 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 MGAT5BQ3V5L5 792 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ATF7IP2Q5U623 682 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 IL27RAQ6UWB1 636 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 C12orf40Q86WS4 652 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ZCCHC9Q8N567 271 aaKnown RBP7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 FAM184AQ8NB25 1140 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 OR10T2Q8NGX3 314 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 C1orf216Q8TAB5 229 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 KCNV2Q8TDN2 545 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 LRRC15Q8TF66 581 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TSC1Q92574 1164 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ZNF516Q92618 1163 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 MRPS31Q92665 395 aaKnown RBP7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 INTS4Q96HW7 963 aaKnown RBP7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 PNKPQ96T60 521 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CCDC94Q9BW85 323 aaPredicted RBP7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 BRMS1Q9HCU9 246 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 PTPRHQ9HD43 1115 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TOPORSQ9NS56 1045 aaPredicted RBP7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 GCNT4Q9P109 453 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 VPS54Q9P1Q0 977 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CNTN3Q9P232 1028 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 PCDHA4Q9UN74 947 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NFE2L3Q9Y4A8 694 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 PCDHGA1Q9Y5H4 931 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TMEM131Q92545 1883 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 COL12A1Q99715 3063 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CLEC18AA5D8T8 446 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 MYMKA6NI61 221 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NDUFS2O75306 463 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CD2BP2O95400 341 aaKnown RBP7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 APODP05090 189 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 HAPLN1P10915 354 aaPredicted RBP7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 LIG1P18858 919 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NDUFV2P19404 249 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TYMPP19971 482 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 HNF1BP35680 557 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 GGCXP38435 758 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 EIF2DP41214 584 aaKnown RBP7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 MLLT3P42568 568 aaPredicted RBP7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TNFRSF4P43489 277 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CDR1P51861 262 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 UCNP55089 124 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ZXDBP98169 803 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ST3GAL1Q11201 340 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NFATC3Q12968 1075 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 DMP1Q13316 513 aaPredicted RBP7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SAFBQ15424 915 aaKnown RBP eCLIP7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TAF12Q16514 161 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ZC2HC1CQ53FD0 456 aaPredicted RBP7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NCAPH2Q6IBW4 605 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 OVOS1Q6IE37 1185 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CLEC18BQ6UXF7 455 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 USP49Q70CQ1 688 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 USP37Q86T82 979 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 LRRTM3Q86VH5 581 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 HSCBQ8IWL3 235 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ADGRG2Q8IZP9 1017 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 BLIDQ8IZY5 108 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 PHTF2Q8N3S3 785 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CLEC18CQ8NCF0 446 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 PSMG3-AS1Q96PY0 264 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ZCWPW1Q9H0M4 648 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CDT1Q9H211 546 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TMEM206Q9H813 350 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TUBGCP4Q9UGJ1 667 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TNFSF13BQ9Y275 285 aa7.75□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CACNA1DQ01668 2161 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 C2CD3Q4AC94 2353 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 A0A1B0GVT2 93 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ABLIM1O14639 778 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 BCAT2O15382 392 aaPredicted RBP7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SUV39H1O43463 412 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 PCDHGA12O60330 932 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 JAK2O60674 1132 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 USO1O60763 962 aaKnown RBP7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 AFPP02771 609 aaKnown RBP7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CYP17A1P05093 508 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 USP17L7P0C7H9 530 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 XRCC6P12956 609 aaKnown RBP eCLIP7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 PDCP20941 246 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 LRPAP1P30533 357 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 GRIA2P42262 883 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 GRK6P43250 576 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 RIPPLY3P57055 190 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 VAC14Q08AM6 782 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 DHCR24Q15392 516 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SF3A1Q15459 793 aaKnown RBP7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NPY5RQ15761 445 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms