RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 SLC44A3Q8N4M1 653 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 C12orf29Q8N999 325 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 SLC30A5Q8TAD4 765 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 MYCBPAPQ8TBZ2 947 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 SLC20A1Q8WUM9 679 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 RSAD2Q8WXG1 361 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 HNRNPABQ99729 332 aaKnown RBP17.56■□□□□ 0.4
GCDH-213ENST00000590627 NHEJ1Q9H9Q4 299 aaPredicted RBP17.56■□□□□ 0.4
GCDH-213ENST00000590627 CRTAC1Q9NQ79 661 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 ZFP37Q9Y6Q3 630 aaPredicted RBP17.56■□□□□ 0.4
GCDH-213ENST00000590627 SPTBN4Q9H254 2564 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 MYBPHLA2RUH7 354 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 NRDCO43847 1150 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 ATP2C2O75185 946 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 CALCAP01258 141 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 CFHP08603 1231 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 PSMC1P62191 440 aaKnown RBP17.55■□□□□ 0.4
GCDH-213ENST00000590627 FMO1Q01740 532 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 PSMD5Q16401 504 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 PRSS55Q6UWB4 352 aaPredicted RBP17.55■□□□□ 0.4
GCDH-213ENST00000590627 LRRTM3Q86VH5 581 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 VPS36Q86VN1 386 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 GLYCTKQ8IVS8 523 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 DCP1BQ8IZD4 617 aaKnown RBP17.55■□□□□ 0.4
GCDH-213ENST00000590627 DTWD2Q8NBA8 298 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 NKD2Q969F2 451 aaPredicted RBP17.55■□□□□ 0.4
GCDH-213ENST00000590627 CYFIP2Q96F07 1278 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 CCDC42Q96M95 316 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 KCNF1Q9H3M0 494 aa17.55■□□□□ 0.4
GCDH-213ENST00000590627 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.55■□□□□ 0.4
GCDH-213ENST00000590627 KRBA1A5PL33 1030 aa17.54■□□□□ 0.4
GCDH-213ENST00000590627 MMEP08473 750 aa17.54■□□□□ 0.4
GCDH-213ENST00000590627 HNRNPA1P09651 372 aaKnown RBP eCLIP17.54■□□□□ 0.4
GCDH-213ENST00000590627 RPL17P18621 184 aaKnown RBP17.54■□□□□ 0.4
GCDH-213ENST00000590627 TNFAIP3P21580 790 aa17.54■□□□□ 0.4
GCDH-213ENST00000590627 SMARCB1Q12824 385 aa17.54■□□□□ 0.4
GCDH-213ENST00000590627 ANGPT1Q15389 498 aa17.54■□□□□ 0.4
GCDH-213ENST00000590627 HS1BP3Q53T59 392 aa17.54■□□□□ 0.4
GCDH-213ENST00000590627 MDH1BQ5I0G3 518 aa17.54■□□□□ 0.4
GCDH-213ENST00000590627 RSPO2Q6UXX9 243 aaPredicted RBP17.54■□□□□ 0.4
GCDH-213ENST00000590627 TRIM72Q6ZMU5 477 aa17.54■□□□□ 0.4
GCDH-213ENST00000590627 FUKQ8N0W3 1084 aa17.54■□□□□ 0.4
GCDH-213ENST00000590627 TMEM209Q96SK2 561 aa17.54■□□□□ 0.4
GCDH-213ENST00000590627 LPIN3Q9BQK8 851 aa17.54■□□□□ 0.4
GCDH-213ENST00000590627 LHX5Q9H2C1 402 aa17.54■□□□□ 0.4
GCDH-213ENST00000590627 FBXW11Q9UKB1 542 aa17.54■□□□□ 0.4
GCDH-213ENST00000590627 SOWAHDA6NJG2 315 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 ANHXE9PGG2 379 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 DDX3XO00571 662 aaKnown RBP eCLIP17.53■□□□□ 0.41e-7■■□□□ 11.8
GCDH-213ENST00000590627 ARHGAP6O43182 974 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 LSM8O95777 96 aaKnown RBP17.53■□□□□ 0.4
GCDH-213ENST00000590627 CDH5P33151 784 aaPredicted RBP17.53■□□□□ 0.4
GCDH-213ENST00000590627 GPR17Q13304 367 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 HTR4Q13639 388 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 SLC18A3Q16572 532 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 NFE2Q16621 373 aaPredicted RBP17.53■□□□□ 0.4
GCDH-213ENST00000590627 PKDCCQ504Y2 493 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 PPP1R26Q5T8A7 1209 aaPredicted RBP17.53■□□□□ 0.4
GCDH-213ENST00000590627 TAF3Q5VWG9 929 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 RAD9BQ6WBX8 426 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 PAQR9Q6ZVX9 377 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 GET4Q7L5D6 327 aaPredicted RBP17.53■□□□□ 0.4
GCDH-213ENST00000590627 ANKRD52Q8NB46 1076 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 PCED1BQ96HM7 432 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 PCDHB18PQ96TA0 734 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 CLSTN3Q9BQT9 956 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 B3GNT5Q9BYG0 378 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 DEF6Q9H4E7 631 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 FAM49BQ9NUQ9 324 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 ADAMTS1Q9UHI8 967 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 GTF3C4Q9UKN8 822 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 NENFQ9UMX5 172 aa17.53■□□□□ 0.4
GCDH-213ENST00000590627 GVINP1Q7Z2Y8 2422 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 A0A087X0T9 212 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 AKR1B10O60218 316 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 MICAL2O94851 1124 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 LCA5LO95447 670 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 CYP1A1P04798 512 aaPredicted RBP17.52■□□□□ 0.4
GCDH-213ENST00000590627 FAM228BP0C875 321 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 GZMAP12544 262 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 CCDC130P13994 396 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 HOXA9P31269 272 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 CYLC1P35663 651 aaPredicted RBP17.52■□□□□ 0.4
GCDH-213ENST00000590627 KIF11P52732 1056 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 CCDC142Q17RM4 750 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 CFAP221Q4G0U5 840 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 LIN9Q5TKA1 542 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 C4orf50Q6ZRC1 276 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 SLC2A14Q8TDB8 520 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 C2orf15Q8WU43 125 aaKnown RBP17.52■□□□□ 0.4
GCDH-213ENST00000590627 MYLPFQ96A32 169 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 FUBP3Q96I24 572 aaKnown RBP eCLIP17.52■□□□□ 0.4
GCDH-213ENST00000590627 ZNF518BQ9C0D4 1074 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 ABCB6Q9NP58 842 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 SLC2A4RGQ9NR83 387 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 TMLHEQ9NVH6 421 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 TSPAN16Q9UKR8 245 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 CDY1Q9Y6F8 540 aa17.52■□□□□ 0.4
GCDH-213ENST00000590627 EPN1Q9Y6I3 576 aaPredicted RBP17.52■□□□□ 0.4
GCDH-213ENST00000590627 EIF3CLB5ME19 914 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms