RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 UBA7P41226 1012 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 STAT6P42226 847 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 DYNLL1P63167 89 aaKnown RBP5.8□□□□□ -1.48
CAPN3-217ENST00000567817 SMAD3P84022 425 aaKnown RBP5.8□□□□□ -1.48
CAPN3-217ENST00000567817 TFAP4Q01664 338 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 PPATQ06203 517 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 NFYCQ13952 458 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 NPY5RQ15761 445 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 C21orf62-AS1Q17RA5 79 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 COBLL1Q53SF7 1204 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 AGBL4Q5VU57 503 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 TAF3Q5VWG9 929 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 TRIM68Q6AZZ1 485 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 TMCO3Q6UWJ1 677 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 ZNF662Q6ZS27 426 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 PIK3AP1Q6ZUJ8 805 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 TMEM139Q8IV31 216 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 TXLNBQ8N3L3 684 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 SRBD1Q8N5C6 995 aaKnown RBP5.8□□□□□ -1.48
CAPN3-217ENST00000567817 PDILTQ8N807 584 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 CHST13Q8NET6 341 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 DNERQ8NFT8 737 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 RASSF8Q8NHQ8 419 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 RABGGTAQ92696 567 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 DHTKD1Q96HY7 919 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-217ENST00000567817 MAML3Q96JK9 1138 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 C16orf92Q96LL3 132 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 LMF1Q96S06 567 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 LBHD1Q9BQE6 289 aaPredicted RBP5.8□□□□□ -1.48
CAPN3-217ENST00000567817 KRTAP9-3Q9BYQ3 159 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 RAB34Q9BZG1 259 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.8□□□□□ -1.48
CAPN3-217ENST00000567817 GLT8D2Q9H1C3 349 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 THAP9Q9H5L6 903 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 VEZTQ9HBM0 779 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 C6orf50Q9HD87 102 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 BARHL2Q9NY43 387 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 SEC63Q9UGP8 760 aaKnown RBP5.8□□□□□ -1.48
CAPN3-217ENST00000567817 FZD1Q9UP38 647 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 SLC45A1Q9Y2W3 748 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 PLIN4Q96Q06 1357 aa5.8□□□□□ -1.48
CAPN3-217ENST00000567817 ABCB11O95342 1321 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 A0A087WWV3 80 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 GPR75-ASB3A0A0A6YYF3 556 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 SNAP23O00161 211 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 URI1O94763 535 aaPredicted RBP5.79□□□□□ -1.48
CAPN3-217ENST00000567817 IPO7O95373 1038 aaKnown RBP5.79□□□□□ -1.48
CAPN3-217ENST00000567817 F2P00734 622 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 RPN1P04843 607 aaKnown RBP5.79□□□□□ -1.48
CAPN3-217ENST00000567817 PARP1P09874 1014 aaKnown RBP5.79□□□□□ -1.48
CAPN3-217ENST00000567817 MCM3P25205 808 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 NOVP48745 357 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 MEOX1P50221 254 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 KRTAP10-2P60368 255 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 RAC3P60763 192 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 GNG11P61952 73 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 DSG1Q02413 1049 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 DMTNQ08495 405 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 ADCY1Q08828 1119 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 GPS2Q13227 327 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 RNF151Q2KHN1 245 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 SPECC1Q5M775 1068 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 RRAGBQ5VZM2 374 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 ISM2Q6H9L7 571 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 CNNM4Q6P4Q7 775 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 TRIM65Q6PJ69 517 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 CYP26C1Q6V0L0 522 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 LARP4Q71RC2 724 aaKnown RBP eCLIP5.79□□□□□ -1.48
CAPN3-217ENST00000567817 RASGRP2Q7LDG7 609 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 APTXQ7Z2E3 356 aaKnown RBP5.79□□□□□ -1.48
CAPN3-217ENST00000567817 ZZZ3Q8IYH5 903 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 AHI1Q8N157 1196 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 MSL3Q8N5Y2 521 aaKnown RBP5.79□□□□□ -1.48
CAPN3-217ENST00000567817 GOLGA1Q92805 767 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 COA7Q96BR5 231 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 RRP36Q96EU6 259 aaKnown RBP5.79□□□□□ -1.48
CAPN3-217ENST00000567817 NEIL1Q96FI4 390 aaPredicted RBP5.79□□□□□ -1.48
CAPN3-217ENST00000567817 EPSTI1Q96J88 318 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 RPGRIP1Q96KN7 1286 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 C8orf49Q96NF6 230 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 C1QTNF3Q9BXJ4 246 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 KIAA1683Q9H0B3 1180 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 ZMYND12Q9H0C1 365 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 INTS13Q9NVM9 706 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 OXSMQ9NWU1 459 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 CPA4Q9UI42 421 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 CDC42EP3Q9UKI2 254 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 NR2E1Q9Y466 385 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 V9GYY5 206 aaPredicted RBP5.79□□□□□ -1.48
CAPN3-217ENST00000567817 ALPK3Q96L96 1907 aa5.79□□□□□ -1.48
CAPN3-217ENST00000567817 BDP1A6H8Y1 2624 aa5.78□□□□□ -1.48
CAPN3-217ENST00000567817 GAKO14976 1311 aa5.78□□□□□ -1.48
CAPN3-217ENST00000567817 CACNA1AO00555 2505 aa5.78□□□□□ -1.48
CAPN3-217ENST00000567817 CLRN2A0PK11 232 aa5.78□□□□□ -1.48
CAPN3-217ENST00000567817 CCDC151A5D8V7 595 aa5.78□□□□□ -1.48
CAPN3-217ENST00000567817 PATE3B3GLJ2 98 aa5.78□□□□□ -1.48
CAPN3-217ENST00000567817 TMEM232C9JQI7 657 aa5.78□□□□□ -1.48
CAPN3-217ENST00000567817 PDHXO00330 501 aa5.78□□□□□ -1.48
CAPN3-217ENST00000567817 TNPO2O14787 897 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms