RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 FAM126AQ9BYI3 521 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-209ENST00000567635 IMPG2Q9BZV3 1241 aa7.35□□□□□ -1.23
SF3B3-209ENST00000567635 ZNF518BQ9C0D4 1074 aa7.35□□□□□ -1.23
SF3B3-209ENST00000567635 DNAI2Q9GZS0 605 aa7.35□□□□□ -1.23
SF3B3-209ENST00000567635 SDCBP2Q9H190 292 aa7.35□□□□□ -1.23
SF3B3-209ENST00000567635 CHRDQ9H2X0 955 aa7.35□□□□□ -1.23
SF3B3-209ENST00000567635 EBF3Q9H4W6 596 aa7.35□□□□□ -1.23
SF3B3-209ENST00000567635 CYP3A43Q9HB55 503 aa7.35□□□□□ -1.23
SF3B3-209ENST00000567635 TMEM8AQ9HCN3 771 aa7.35□□□□□ -1.23
SF3B3-209ENST00000567635 TMEM30AQ9NV96 361 aa7.35□□□□□ -1.23
SF3B3-209ENST00000567635 DUS2Q9NX74 493 aaKnown RBP7.35□□□□□ -1.23
SF3B3-209ENST00000567635 ZNF292O60281 2723 aa7.35□□□□□ -1.23
SF3B3-209ENST00000567635 EML5Q05BV3 1969 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 ZNF840PA6NDX5 716 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 OTOL1A6NHN0 477 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-209ENST00000567635 TRDMT1O14717 391 aaKnown RBP7.34□□□□□ -1.23
SF3B3-209ENST00000567635 AP1G2O75843 785 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 ABL1P00519 1130 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 TRIM49P0CI25 452 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 TRIM49CP0CI26 452 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 EPB41P11171 864 aaKnown RBP7.34□□□□□ -1.23
SF3B3-209ENST00000567635 ARSAP15289 507 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 TCF3P15923 654 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 ASPAP45381 313 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 CXCL12P48061 93 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 CCR3P51677 355 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 FKBP3Q00688 224 aaKnown RBP7.34□□□□□ -1.23
SF3B3-209ENST00000567635 GRSF1Q12849 480 aaKnown RBP eCLIP7.34□□□□□ -1.23
SF3B3-209ENST00000567635 NR1H3Q13133 447 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 STIM1Q13586 685 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 PON2Q15165 354 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 KRT39Q6A163 491 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 TRIM68Q6AZZ1 485 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 TXNDC11Q6PKC3 985 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 FAM35AQ86V20 835 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 FUKQ8N0W3 1084 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 ADSSL1Q8N142 457 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 SYNPOQ8N3V7 929 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 TTC16Q8NEE8 873 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 TAS1R2Q8TE23 839 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 SH3RF2Q8TEC5 729 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 NELL1Q92832 810 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 ERCC4Q92889 916 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-209ENST00000567635 ATP2A3Q93084 1043 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 EXOC4Q96A65 974 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 SMARCD1Q96GM5 515 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 SLITRK1Q96PX8 696 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 RNF38Q9H0F5 515 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 LINC00597Q9H2U6 94 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 MMRN2Q9H8L6 949 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 DMAP1Q9NPF5 467 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-209ENST00000567635 HPS4Q9NQG7 708 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.34□□□□□ -1.233e-25■■■■■ 109.6
SF3B3-209ENST00000567635 PRMT8Q9NR22 394 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-209ENST00000567635 RBM12Q9NTZ6 932 aaKnown RBP7.34□□□□□ -1.23
SF3B3-209ENST00000567635 COMMD8Q9NX08 183 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 ZSCAN32Q9NX65 697 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 IL37Q9NZH6 218 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 CHORDC1Q9UHD1 332 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-209ENST00000567635 ARHGAP26Q9UNA1 814 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 PCDHGA2Q9Y5H1 932 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 PI4KAP42356 2102 aa7.34□□□□□ -1.23
SF3B3-209ENST00000567635 CEP250Q9BV73 2442 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 VPS13AQ96RL7 3174 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 LEFTY2O00292 366 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 TNFRSF10BO14763 440 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 PSMA7O14818 248 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 SLC16A3O15427 465 aaKnown RBP7.33□□□□□ -1.24
SF3B3-209ENST00000567635 KINO60870 393 aaKnown RBP7.33□□□□□ -1.24
SF3B3-209ENST00000567635 GABBR2O75899 941 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 CCDC130P13994 396 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 IFNAR2P48551 515 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 GALK1P51570 392 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 SLC7A9P82251 487 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 LRRC63Q05C16 580 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 INCA1Q0VD86 236 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 IFRD2Q12894 506 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-209ENST00000567635 ORC1Q13415 861 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 MTF1Q14872 753 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 ZNF77Q15935 545 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 TMEM196Q5HYL7 178 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 WDR44Q5JSH3 913 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 ISM2Q6H9L7 571 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 TSSK4Q6SA08 328 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 CPA6Q8N4T0 437 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 TTC39CQ8N584 583 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 KIAA1958Q8N8K9 716 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 C12orf29Q8N999 325 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 ZBTB44Q8NCP5 570 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 FBXL13Q8NEE6 735 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 PDZD8Q8NEN9 1154 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 SCAMP5Q8TAC9 235 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 RIN3Q8TB24 985 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 SLC2A14Q8TDB8 520 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 OSCP1Q8WVF1 389 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 OVCA2Q8WZ82 227 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 SEMA4DQ92854 862 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 FBXO32Q969P5 355 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 CYFIP2Q96F07 1278 aa7.33□□□□□ -1.24
SF3B3-209ENST00000567635 DHTKD1Q96HY7 919 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms