RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 OAS1P00973 400 aaKnown RBP13.64□□□□□ -0.23
RNF40-208ENST00000565995 GRIA2P42262 883 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 SLC6A11P48066 632 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 USP46P62068 366 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 RBP5P82980 135 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 TFAMQ00059 246 aaKnown RBP13.64□□□□□ -0.23
RNF40-208ENST00000565995 KCNA1Q09470 495 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 MESP2Q0VG99 397 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 HNRNPDQ14103 355 aaKnown RBP13.64□□□□□ -0.23
RNF40-208ENST00000565995 MAPRE1Q15691 268 aaKnown RBP13.64□□□□□ -0.23
RNF40-208ENST00000565995 CCDC142Q17RM4 750 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 DUOXA1Q1HG43 343 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 DENND5BQ6ZUT9 1274 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 FILIP1Q7Z7B0 1213 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 SCN4BQ8IWT1 228 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 TMEFF1Q8IYR6 380 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 ADGRF2Q8IZF7 708 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 FRMD1Q8N878 549 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 KRI1Q8N9T8 703 aaKnown RBP13.64□□□□□ -0.23
RNF40-208ENST00000565995 TXNDC5Q8NBS9 432 aaKnown RBP13.64□□□□□ -0.23
RNF40-208ENST00000565995 KBTBD7Q8WVZ9 684 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 RLN3Q8WXF3 142 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 FAM213AQ9BRX8 229 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 ZHX3Q9H4I2 956 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 CAPN10Q9HC96 672 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 CRTAC1Q9NQ79 661 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 KLK13Q9UKR3 277 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 CDH9Q9ULB4 789 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 SLC6A14Q9UN76 642 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 LHX6Q9UPM6 363 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 EXOC7Q9UPT5 735 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 SNX9Q9Y5X1 595 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 CKAP5Q14008 2032 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 CELSR3Q9NYQ7 3312 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 MAP3K13O43283 966 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 HCRTO43612 131 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 ATP2C2O75185 946 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 BMP15O95972 392 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 APODP05090 189 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 SERPINF2P08697 491 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 FAM163BP0C2L3 166 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 LMO2P25791 158 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 GRIN1Q05586 938 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 L1TD1Q5T7N2 865 aaKnown RBP13.63□□□□□ -0.23
RNF40-208ENST00000565995 EMC10Q5UCC4 262 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 RABEPKQ7Z6M1 372 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 RAB44Q7Z6P3 723 aaPredicted RBP13.63□□□□□ -0.23
RNF40-208ENST00000565995 SFR1Q86XK3 245 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 SFTPA1Q8IWL2 248 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 DNAJC19Q96DA6 116 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 C8orf48Q96LL4 319 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 ACCSQ96QU6 501 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 OLFML3Q9NRN5 406 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 CABIN1Q9Y6J0 2220 aa13.63□□□□□ -0.23
RNF40-208ENST00000565995 SPAARA0A1B0GVQ0 90 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.62□□□□□ -0.23
RNF40-208ENST00000565995 TRIM66O15016 1216 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 AP5Z1O43299 807 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 GAP43P17677 238 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 WARSP23381 471 aaKnown RBP13.62□□□□□ -0.23
RNF40-208ENST00000565995 BDNFP23560 247 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 ITPKAP23677 461 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 RDXP35241 583 aaKnown RBP13.62□□□□□ -0.23
RNF40-208ENST00000565995 TIE1P35590 1138 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 SIM1P81133 766 aaPredicted RBP13.62□□□□□ -0.23
RNF40-208ENST00000565995 MYO1EQ12965 1108 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 ZNF423Q2M1K9 1284 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 LYSMD4Q5XG99 296 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 SLC36A4Q6YBV0 504 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 C12orf40Q86WS4 652 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 PROSER1Q86XN7 944 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 DDX42Q86XP3 938 aaKnown RBP eCLIP13.62□□□□□ -0.23
RNF40-208ENST00000565995 TTC16Q8NEE8 873 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 MYCBPAPQ8TBZ2 947 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 MYLPFQ96A32 169 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 OTUB2Q96DC9 234 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 SYT15Q9BQS2 421 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 INTS13Q9NVM9 706 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 DNAAF2Q9NVR5 837 aaKnown RBP13.62□□□□□ -0.23
RNF40-208ENST00000565995 RBAKQ9NYW8 714 aaPredicted RBP13.62□□□□□ -0.23
RNF40-208ENST00000565995 TBC1D14Q9P2M4 693 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 STARD13Q9Y3M8 1113 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 BPTFQ12830 3046 aa13.62□□□□□ -0.23
RNF40-208ENST00000565995 E2F8A0AVK6 867 aa13.61□□□□□ -0.23
RNF40-208ENST00000565995 KIAA0391O15091 583 aaKnown RBP13.61□□□□□ -0.23
RNF40-208ENST00000565995 GJB3O75712 270 aa13.61□□□□□ -0.23
RNF40-208ENST00000565995 ADH1CP00326 375 aa13.61□□□□□ -0.23
RNF40-208ENST00000565995 CD59P13987 128 aa13.61□□□□□ -0.23
RNF40-208ENST00000565995 GRIK1P39086 918 aa13.61□□□□□ -0.23
RNF40-208ENST00000565995 MAPK8P45983 427 aa13.61□□□□□ -0.23
RNF40-208ENST00000565995 GFPT1Q06210 699 aaPredicted RBP13.61□□□□□ -0.23
RNF40-208ENST00000565995 RESTQ13127 1097 aa13.61□□□□□ -0.23
RNF40-208ENST00000565995 SLC14A1Q13336 389 aa13.61□□□□□ -0.23
RNF40-208ENST00000565995 SNX30Q5VWJ9 437 aa13.61□□□□□ -0.23
RNF40-208ENST00000565995 KIAA1211LQ6NV74 962 aa13.61□□□□□ -0.23
RNF40-208ENST00000565995 ETFBKMTQ8IXQ9 262 aa13.61□□□□□ -0.23
RNF40-208ENST00000565995 SAAL1Q96ER3 474 aa13.61□□□□□ -0.23
RNF40-208ENST00000565995 PCED1BQ96HM7 432 aa13.61□□□□□ -0.23
RNF40-208ENST00000565995 MRPL44Q9H9J2 332 aaKnown RBP13.61□□□□□ -0.23
RNF40-208ENST00000565995 PDE11AQ9HCR9 933 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms