RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 CDR1P51861 262 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 SLC6A3Q01959 620 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 CAV1Q03135 178 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 LMNB2Q03252 620 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 CACNB2Q08289 660 aaPredicted RBP20.04■□□□□ 0.8
SMPD3-203ENST00000563226 SV2CQ496J9 727 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 CYP4F22Q6NT55 531 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 TRMT10CQ7L0Y3 403 aaKnown RBP20.04■□□□□ 0.8
SMPD3-203ENST00000563226 HOOK3Q86VS8 718 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 RFX6Q8HWS3 928 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 ADGRF2Q8IZF7 708 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 TLCD1Q96CP7 247 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 SENP6Q9GZR1 1112 aaPredicted RBP20.04■□□□□ 0.8
SMPD3-203ENST00000563226 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.04■□□□□ 0.8
SMPD3-203ENST00000563226 SEPT4O43236 478 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 ITGAVP06756 1048 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 TKTP29401 623 aaKnown RBP20.03■□□□□ 0.8
SMPD3-203ENST00000563226 PLCB3Q01970 1234 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 GSTCDQ8NEC7 633 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 SLC2A14Q8TDB8 520 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 LPPQ93052 612 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 CALN1Q9BXU9 219 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 DPYSL4O14531 572 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 DNALI1O14645 258 aaPredicted RBP20.03■□□□□ 0.8
SMPD3-203ENST00000563226 ATP2C2O75185 946 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 RARBP10826 455 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 PECAM1P16284 738 aaPredicted RBP20.03■□□□□ 0.8
SMPD3-203ENST00000563226 TFE3P19532 575 aaPredicted RBP20.03■□□□□ 0.8
SMPD3-203ENST00000563226 CCND3P30281 292 aaPredicted RBP20.03■□□□□ 0.8
SMPD3-203ENST00000563226 MLH1P40692 756 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 SLCO1A2P46721 670 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 GDF10P55107 478 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 SERINC5Q86VE9 423 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 ANKRD52Q8NB46 1076 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 TSPAN18Q96SJ8 248 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 FAM105AQ9NUU6 356 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 GPATCH2LQ9NWQ4 482 aa20.03■□□□□ 0.8
SMPD3-203ENST00000563226 DCAF8L1A6NGE4 600 aa20.02■□□□□ 0.8
SMPD3-203ENST00000563226 SGK1O00141 431 aa20.02■□□□□ 0.8
SMPD3-203ENST00000563226 LRPAP1P30533 357 aa20.02■□□□□ 0.8
SMPD3-203ENST00000563226 MGAT3Q09327 533 aa20.02■□□□□ 0.8
SMPD3-203ENST00000563226 BST2Q10589 180 aaKnown RBP20.02■□□□□ 0.8
SMPD3-203ENST00000563226 GPS1Q13098 491 aa20.02■□□□□ 0.8
SMPD3-203ENST00000563226 KYNUQ16719 465 aa20.02■□□□□ 0.8
SMPD3-203ENST00000563226 STK32AQ8WU08 396 aa20.02■□□□□ 0.8
SMPD3-203ENST00000563226 FAM172AQ8WUF8 416 aa20.02■□□□□ 0.8
SMPD3-203ENST00000563226 ADAM33Q9BZ11 813 aa20.02■□□□□ 0.8
SMPD3-203ENST00000563226 AGO3Q9H9G7 860 aaKnown RBP20.02■□□□□ 0.8
SMPD3-203ENST00000563226 NGRNQ9NPE2 291 aaKnown RBP20.02■□□□□ 0.8
SMPD3-203ENST00000563226 NINJ2Q9NZG7 142 aa20.02■□□□□ 0.8
SMPD3-203ENST00000563226 SLC12A6Q9UHW9 1150 aa20.02■□□□□ 0.8
SMPD3-203ENST00000563226 HUS1O60921 280 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 IFNB1P01574 187 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 LCP1P13796 627 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 ACAT1P24752 427 aaKnown RBP20.01■□□□□ 0.79
SMPD3-203ENST00000563226 MDH1P40925 334 aaKnown RBP20.01■□□□□ 0.79
SMPD3-203ENST00000563226 BCAT1P54687 386 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 CDH6P55285 790 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 PPP2R2AP63151 447 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 BBOF1Q8ND07 529 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 GAD1Q99259 594 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 SPC25Q9HBM1 224 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 XPNPEP3Q9NQH7 507 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 MIOSQ9NXC5 875 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 PRPSAP2O60256 369 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 ENDOD1O94919 500 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 ASGR1P07306 291 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 ELNP15502 786 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 IFI35P80217 286 aaPredicted RBP20.01■□□□□ 0.79
SMPD3-203ENST00000563226 DPYSL3Q14195 570 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 ZC3H12AQ5D1E8 599 aaKnown RBP20.01■□□□□ 0.79
SMPD3-203ENST00000563226 SCYL2Q6P3W7 929 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 NPNTQ6UXI9 565 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 PGM2Q96G03 612 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 TMEM109Q9BVC6 243 aa20.01■□□□□ 0.79
SMPD3-203ENST00000563226 CASP8AP2Q9UKL3 1982 aa20■□□□□ 0.79
SMPD3-203ENST00000563226 CYB561D2O14569 222 aa20■□□□□ 0.79
SMPD3-203ENST00000563226 TTC4O95801 387 aa20■□□□□ 0.79
SMPD3-203ENST00000563226 WARSP23381 471 aaKnown RBP20■□□□□ 0.79
SMPD3-203ENST00000563226 LSP1P33241 339 aa20■□□□□ 0.79
SMPD3-203ENST00000563226 KCNA10Q16322 511 aa20■□□□□ 0.79
SMPD3-203ENST00000563226 WSCD1Q658N2 575 aa20■□□□□ 0.79
SMPD3-203ENST00000563226 B4GALNT4Q76KP1 1039 aa20■□□□□ 0.79
SMPD3-203ENST00000563226 RSPH3Q86UC2 560 aa20■□□□□ 0.79
SMPD3-203ENST00000563226 TOP6BLQ8N6T0 577 aa20■□□□□ 0.79
SMPD3-203ENST00000563226 B3GALNT2Q8NCR0 500 aa20■□□□□ 0.79
SMPD3-203ENST00000563226 PCDH9Q9HC56 1237 aa20■□□□□ 0.79
SMPD3-203ENST00000563226 CLDN5O00501 218 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 SDC4P31431 198 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 NKX3-2P78367 333 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 CA9Q16790 459 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 LONRF1Q17RB8 773 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 ZCCHC9Q8N567 271 aaKnown RBP19.99■□□□□ 0.79
SMPD3-203ENST00000563226 ARFGAP2Q8N6H7 521 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 CCHCR1Q8TD31 782 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 C9orf72Q96LT7 481 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 RSAD1Q9HA92 442 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 APOC4-APOC2K7ER74 178 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 APOC2P02655 101 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 RPL34P49207 117 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms