RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 OTUD7BQ6GQQ9 843 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 ZNF280DQ6N043 979 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 TAS1R1Q7RTX1 841 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 ANKRD18AQ8IVF6 992 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 LCORLQ8N3X6 602 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 MDGA1Q8NFP4 955 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 ZNF384Q8TF68 577 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 ATXN2LQ8WWM7 1075 aaKnown RBP4.95□□□□□ -1.62
TMOD3-207ENST00000560549 AUTS2Q8WXX7 1259 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 FAM84BQ96KN1 310 aaPredicted RBP4.95□□□□□ -1.62
TMOD3-207ENST00000560549 NUP88Q99567 741 aaPredicted RBP4.95□□□□□ -1.62
TMOD3-207ENST00000560549 ELAC2Q9BQ52 826 aaKnown RBP4.95□□□□□ -1.62
TMOD3-207ENST00000560549 RRAGDQ9NQL2 400 aaPredicted RBP4.95□□□□□ -1.62
TMOD3-207ENST00000560549 DMRT3Q9NQL9 472 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 CTNNA3Q9UI47 895 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 MRFAP1Q9Y605 127 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 ZNF804BA4D1E1 1349 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 NEDD4P46934 1319 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 SALL1Q9NSC2 1324 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 ANKRD36CQ5JPF3 1778 aa4.95□□□□□ -1.62
TMOD3-207ENST00000560549 DDX60Q8IY21 1712 aaKnown RBP4.95□□□□□ -1.62
TMOD3-207ENST00000560549 ZNF213O14771 459 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 ZNF202O95125 648 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 MBD3O95983 291 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 SRGNP10124 158 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 TYRP1P17643 537 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 ADKP55263 362 aaKnown RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 RPS8P62241 208 aaKnown RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 ZNF267Q14586 743 aaPredicted RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 IMMTQ16891 758 aaKnown RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 ALFQ53S48 1182 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 RRP12Q5JTH9 1297 aaKnown RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 CCDC70Q6NSX1 233 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 ZSCAN25Q6NSZ9 544 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 CATIPQ7Z7H3 387 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 COL23A1Q86Y22 540 aaPredicted RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 ANKRD35Q8N283 1001 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 FBXL16Q8N461 479 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 MIGA1Q8NAN2 632 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 OR14C36Q8NHC7 312 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 ZNF274Q96GC6 653 aaPredicted RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 PGBD1Q96JS3 809 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 AIFM3Q96NN9 605 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 LLPHQ9BRT6 129 aaKnown RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 HERPUD2Q9BSE4 406 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 CSRNP2Q9H175 543 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 ZHX3Q9H4I2 956 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 SLITRK6Q9H5Y7 841 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 GJB4Q9NTQ9 266 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 KCNG1Q9UIX4 513 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 XDHP47989 1333 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 KLF18A0A0U1RQI7 1052 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 UBE2Q2LH0YL09 131 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 SH2B2O14492 632 aaPredicted RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 PIP5K1CO60331 668 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 IL33O95760 270 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 LDHCP07864 332 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 HK1P19367 917 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 NR4A1P22736 598 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 HALP42357 657 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 MAN2A2P49641 1150 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 NPEPPSP55786 919 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 UBE2HP62256 183 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 DYNLL1P63167 89 aaKnown RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 GUCY1B3Q02153 619 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 ABHD18Q0P651 414 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 TUBA3CQ13748 450 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 SAFBQ15424 915 aaKnown RBP eCLIP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 CCDC178Q5BJE1 867 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 TUBA3EQ6PEY2 450 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 NBPF5PQ86XG9 351 aaPredicted RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 CPXCR1Q8N123 301 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 PPM1NQ8N819 430 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 ANKRD42Q8N9B4 389 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 OR2I1PQ8NGU4 316 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 NCOA7Q8NI08 942 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 GJA10Q969M2 543 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 COA7Q96BR5 231 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 CDC5LQ99459 802 aaKnown RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 MNTQ99583 582 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 FUCA2Q9BTY2 467 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 GPR87Q9BY21 358 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 GTPBP4Q9BZE4 634 aaKnown RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 FTOQ9C0B1 505 aaKnown RBP eCLIP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 AS3MTQ9HBK9 375 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 PLCB1Q9NQ66 1216 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 SLC2A4RGQ9NR83 387 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 GPRC5BQ9NZH0 403 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 DDX20Q9UHI6 824 aaKnown RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 ISY1Q9ULR0 285 aaKnown RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 NAP1L2Q9ULW6 460 aaPredicted RBP4.94□□□□□ -1.62
TMOD3-207ENST00000560549 IPPQ9Y573 584 aa4.94□□□□□ -1.62
TMOD3-207ENST00000560549 SPEF2Q9C093 1822 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 C4AP0C0L4 1744 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 COL24A1Q17RW2 1714 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 AKAP11Q9UKA4 1901 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 CYP2D7A0A087X1C5 515 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 KIF28PB7ZC32 967 aa4.93□□□□□ -1.62
TMOD3-207ENST00000560549 ADCY6O43306 1168 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms