RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 NIF3L1Q9GZT8 377 aa18.53■□□□□ 0.56
LTBR-210ENST00000542830 TMEM30AQ9NV96 361 aa18.53■□□□□ 0.56
LTBR-210ENST00000542830 COMMD8Q9NX08 183 aa18.53■□□□□ 0.56
LTBR-210ENST00000542830 PCDHGA2Q9Y5H1 932 aa18.53■□□□□ 0.56
LTBR-210ENST00000542830 MYO15AQ9UKN7 3530 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 AP1G2O75843 785 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 IFNAR2P48551 515 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 NRLP54845 237 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 PON2Q15165 354 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 TRIM68Q6AZZ1 485 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 PAQR9Q6ZVX9 377 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 ZC3H3Q8IXZ2 948 aaKnown RBP18.52■□□□□ 0.56
LTBR-210ENST00000542830 ADSSL1Q8N142 457 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 CPA6Q8N4T0 437 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 RIN3Q8TB24 985 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 SH3RF2Q8TEC5 729 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 ATRIPQ8WXE1 791 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 ATP2A3Q93084 1043 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 FBXO32Q969P5 355 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 EEF2KMTQ96G04 330 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 NT5C1AQ9BXI3 368 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 APOBEC3GQ9HC16 384 aaKnown RBP18.52■□□□□ 0.56
LTBR-210ENST00000542830 KRT82Q9NSB4 513 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 ZSCAN32Q9NX65 697 aa18.52■□□□□ 0.56
LTBR-210ENST00000542830 DUS2Q9NX74 493 aaKnown RBP18.52■□□□□ 0.56
LTBR-210ENST00000542830 FANCMQ8IYD8 2048 aa18.52■□□□□ 0.55
LTBR-210ENST00000542830 USP34Q70CQ2 3546 aa18.52■□□□□ 0.55
LTBR-210ENST00000542830 PSMA7O14818 248 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 ABL1P00519 1130 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 ARSAP15289 507 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 SLC5A3P53794 718 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 SLC7A9P82251 487 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 IFRD2Q12894 506 aaPredicted RBP18.51■□□□□ 0.55
LTBR-210ENST00000542830 CCINQ13939 588 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 SPEM1Q8N4L4 309 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 TTC39CQ8N584 583 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 FBXL13Q8NEE6 735 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 TTC16Q8NEE8 873 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 SLC2A14Q8TDB8 520 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 NELL1Q92832 810 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 ERCC4Q92889 916 aaPredicted RBP18.51■□□□□ 0.55
LTBR-210ENST00000542830 KCNK16Q96T55 309 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 FAM124BQ9H5Z6 455 aaPredicted RBP18.51■□□□□ 0.55
LTBR-210ENST00000542830 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.51■□□□□ 0.55
LTBR-210ENST00000542830 IL37Q9NZH6 218 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 HMGXB4Q9UGU5 601 aa18.51■□□□□ 0.55
LTBR-210ENST00000542830 TRDMT1O14717 391 aaKnown RBP18.5■□□□□ 0.55
LTBR-210ENST00000542830 OLFM2O95897 454 aa18.5■□□□□ 0.55
LTBR-210ENST00000542830 OAS1P00973 400 aaKnown RBP18.5■□□□□ 0.55
LTBR-210ENST00000542830 FAM200BP0CF97 657 aa18.5■□□□□ 0.55
LTBR-210ENST00000542830 CCDC130P13994 396 aa18.5■□□□□ 0.55
LTBR-210ENST00000542830 CXCL12P48061 93 aa18.5■□□□□ 0.55
LTBR-210ENST00000542830 GRSF1Q12849 480 aaKnown RBP eCLIP18.5■□□□□ 0.55
LTBR-210ENST00000542830 NR1H3Q13133 447 aa18.5■□□□□ 0.55
LTBR-210ENST00000542830 WDR44Q5JSH3 913 aa18.5■□□□□ 0.55
LTBR-210ENST00000542830 ANKRD40Q6AI12 368 aa18.5■□□□□ 0.55
LTBR-210ENST00000542830 ZBTB44Q8NCP5 570 aa18.5■□□□□ 0.55
LTBR-210ENST00000542830 DHTKD1Q96HY7 919 aaPredicted RBP18.5■□□□□ 0.55
LTBR-210ENST00000542830 HNRNPABQ99729 332 aaKnown RBP18.5■□□□□ 0.55
LTBR-210ENST00000542830 FBXO44Q9H4M3 255 aa18.5■□□□□ 0.55
LTBR-210ENST00000542830 ECT2Q9H8V3 914 aa18.5■□□□□ 0.55
LTBR-210ENST00000542830 CSNK1G1Q9HCP0 422 aa18.5■□□□□ 0.55
LTBR-210ENST00000542830 RBM12Q9NTZ6 932 aaKnown RBP18.5■□□□□ 0.55
LTBR-210ENST00000542830 RAB20Q9NX57 234 aa18.5■□□□□ 0.55
LTBR-210ENST00000542830 VPS13AQ96RL7 3174 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 FAM92AA1XBS5 289 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 OTOL1A6NHN0 477 aaPredicted RBP18.49■□□□□ 0.55
LTBR-210ENST00000542830 LEFTY2O00292 366 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 TNFRSF10BO14763 440 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 CILPO75339 1184 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 NFATC1O95644 943 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 TUBP50607 506 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 ORC1Q13415 861 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 GAS6Q14393 721 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 EML3Q32P44 896 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 DCAF17Q5H9S7 520 aaPredicted RBP18.49■□□□□ 0.55
LTBR-210ENST00000542830 TMEM196Q5HYL7 178 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 TCERG1LQ5VWI1 586 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 SNX30Q5VWJ9 437 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 TSSK4Q6SA08 328 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 DDX42Q86XP3 938 aaKnown RBP eCLIP18.49■□□□□ 0.55
LTBR-210ENST00000542830 C12orf29Q8N999 325 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 SMOQ99835 787 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 FAM49BQ9NUQ9 324 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 MAN1B1Q9UKM7 699 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 CPQQ9Y646 472 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 WNT6Q9Y6F9 365 aa18.49■□□□□ 0.55
LTBR-210ENST00000542830 SLC9A3R1O14745 358 aaPredicted RBP18.48■□□□□ 0.55
LTBR-210ENST00000542830 PAPSS2O95340 614 aaPredicted RBP18.48■□□□□ 0.55
LTBR-210ENST00000542830 TDGF1P13385 188 aa18.48■□□□□ 0.55
LTBR-210ENST00000542830 CD58P19256 250 aa18.48■□□□□ 0.55
LTBR-210ENST00000542830 GJA4P35212 333 aa18.48■□□□□ 0.55
LTBR-210ENST00000542830 PMS1P54277 932 aaKnown RBP18.48■□□□□ 0.55
LTBR-210ENST00000542830 MAP3K7CLP57077 242 aa18.48■□□□□ 0.55
LTBR-210ENST00000542830 HECTD3Q5T447 861 aa18.48■□□□□ 0.55
LTBR-210ENST00000542830 ZMIZ2Q8NF64 920 aa18.48■□□□□ 0.55
LTBR-210ENST00000542830 SCAMP5Q8TAC9 235 aa18.48■□□□□ 0.55
LTBR-210ENST00000542830 SEMA4DQ92854 862 aa18.48■□□□□ 0.55
LTBR-210ENST00000542830 CYFIP2Q96F07 1278 aa18.48■□□□□ 0.55
LTBR-210ENST00000542830 TWNKQ96RR1 684 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms