RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 TKTL1P51854 596 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 KIF5AQ12840 1032 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 ZNF268Q14587 947 aaPredicted RBP12.14□□□□□ -0.47
CDCA3-206ENST00000536241 RAB41Q5JT25 222 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 LIN9Q5TKA1 542 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 OR6B2Q6IFH4 312 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 ADGRD2Q7Z7M1 963 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 CCAR2Q8N163 923 aaKnown RBP12.14□□□□□ -0.47
CDCA3-206ENST00000536241 MSANTD4Q8NCY6 345 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 STKLD1Q8NE28 680 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 SCAMP5Q8TAC9 235 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 IPO4Q8TEX9 1081 aaKnown RBP12.14□□□□□ -0.47
CDCA3-206ENST00000536241 GIPC2Q8TF65 315 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 CTNNBL1Q8WYA6 563 aaPredicted RBP12.14□□□□□ -0.47
CDCA3-206ENST00000536241 NDRG1Q92597 394 aaKnown RBP12.14□□□□□ -0.47
CDCA3-206ENST00000536241 LMAN2LQ9H0V9 348 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 LZTFL1Q9NQ48 299 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 PTPRDP23468 1912 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 GOLGA8SH3BPF8 625 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 PRRG1O14668 218 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 TNFRSF10BO14763 440 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 PAPSS1O43252 624 aaPredicted RBP12.13□□□□□ -0.47
CDCA3-206ENST00000536241 CYP1A2P05177 515 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 CLCN4P51793 760 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 SNX16P57768 344 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 RPL10AP62906 217 aaKnown RBP12.13□□□□□ -0.47
CDCA3-206ENST00000536241 ADIGQ0VDE8 80 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 IFRD2Q12894 506 aaPredicted RBP12.13□□□□□ -0.47
CDCA3-206ENST00000536241 XYLT1Q86Y38 959 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 TCEAL8Q8IYN2 117 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 NUP93Q8N1F7 819 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 KREMEN2Q8NCW0 462 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 SLC35G2Q8TBE7 412 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 CLEC4CQ8WTT0 213 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 MCRS1Q96EZ8 462 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 CYLDQ9NQC7 956 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 HSFX1Q9UBD0 423 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 SALL4Q9UJQ4 1053 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 MAFFQ9ULX9 164 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 GUCA1BQ9UMX6 200 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 PAXBP1Q9Y5B6 917 aa12.13□□□□□ -0.47
CDCA3-206ENST00000536241 RANBP2P49792 3224 aaKnown RBP12.12□□□□□ -0.47
CDCA3-206ENST00000536241 TCRBV5S1A1TA0A578 114 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 KRT86O43790 486 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 GJB6O95452 261 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 GLUD1P00367 558 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 USP17L7P0C7H9 530 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 MYBL1P10243 752 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 ATF6P18850 670 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 NOP2P46087 812 aaKnown RBP12.12□□□□□ -0.47
CDCA3-206ENST00000536241 ALDH1A3P47895 512 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 SLC5A3P53794 718 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 SLC6A3Q01959 620 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 MAMLD1Q13495 774 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 MTMR3Q13615 1198 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 ARHGAP29Q52LW3 1261 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 PLEKHA7Q6IQ23 1121 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 FAM183BPQ6ZVS7 135 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 TXLNBQ8N3L3 684 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 TRIM11Q96F44 468 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 SPATA17Q96L03 361 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 ULBP1Q9BZM6 244 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 TTYH1Q9H313 450 aaPredicted RBP12.12□□□□□ -0.47
CDCA3-206ENST00000536241 TLE6Q9H808 572 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 PNPLA8Q9NP80 782 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 OSGEPQ9NPF4 335 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 CTTNBP2NLQ9P2B4 639 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 WDR35Q9P2L0 1181 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 STRIP2Q9ULQ0 834 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 USP3Q9Y6I4 520 aa12.12□□□□□ -0.47
CDCA3-206ENST00000536241 LAMA2P24043 3122 aaKnown RBP12.12□□□□□ -0.47
CDCA3-206ENST00000536241 MACROD2A1Z1Q3 448 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 SIGLEC16A6NMB1 481 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 SLC38A8A6NNN8 435 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 SOX1O00570 391 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-206ENST00000536241 BUB1O43683 1085 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 GRAP2O75791 330 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 ZBED1O96006 694 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 EPCAMP16422 314 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 NAP1L1P55209 391 aaKnown RBP12.11□□□□□ -0.47
CDCA3-206ENST00000536241 RNASE9P60153 205 aaKnown RBP12.11□□□□□ -0.47
CDCA3-206ENST00000536241 USP46P62068 366 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 RPL7AP62424 266 aaKnown RBP12.11□□□□□ -0.47
CDCA3-206ENST00000536241 MRPS5P82675 430 aaKnown RBP12.11□□□□□ -0.47
CDCA3-206ENST00000536241 TWF1Q12792 350 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 TAF5Q15542 800 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 PTPROQ16827 1216 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 PRPF38BQ5VTL8 546 aaKnown RBP12.11□□□□□ -0.47
CDCA3-206ENST00000536241 PM20D1Q6GTS8 502 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 OLFML1Q6UWY5 402 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 ZNF662Q6ZS27 426 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 DENND5BQ6ZUT9 1274 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 ZSCAN30Q86W11 494 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 SIX6OS1Q8N1H7 587 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 C3orf20Q8ND61 904 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 SLC7A14Q8TBB6 771 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 SLC22A17Q8WUG5 538 aa12.11□□□□□ -0.47
CDCA3-206ENST00000536241 KHSRPQ92945 711 aaKnown RBP eCLIP12.11□□□□□ -0.47
CDCA3-206ENST00000536241 MRPL38Q96DV4 380 aaKnown RBP12.11□□□□□ -0.47
CDCA3-206ENST00000536241 PIWIL1Q96J94 861 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms