RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 KRT35Q92764 455 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 CCDC28BQ9BUN5 200 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 HAPLN2Q9GZV7 340 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 DHX33Q9H6R0 707 aaKnown RBP14.6□□□□□ -0.07
LIG1-203ENST00000536218 RBPJLQ9UBG7 517 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 A0A0G2JLL6 359 aaPredicted RBP14.6□□□□□ -0.07
LIG1-203ENST00000536218 EDN1P05305 212 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 CYP2C8P10632 490 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 KRT15P19012 456 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 MTTPP55157 894 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 SULT2A1Q06520 285 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 DCTN2Q13561 401 aaKnown RBP14.6□□□□□ -0.07
LIG1-203ENST00000536218 OTOAQ7RTW8 1153 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 NANOGNBQ7Z5D8 188 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 PRRT2Q7Z6L0 340 aaPredicted RBP14.6□□□□□ -0.07
LIG1-203ENST00000536218 CDR2LQ86X02 465 aaPredicted RBP14.6□□□□□ -0.07
LIG1-203ENST00000536218 SEPT1Q8WYJ6 367 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 DGCR14Q96DF8 476 aaKnown RBP14.6□□□□□ -0.07
LIG1-203ENST00000536218 PRR11Q96HE9 360 aaPredicted RBP14.6□□□□□ -0.07
LIG1-203ENST00000536218 NSL1Q96IY1 281 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 C9orf72Q96LT7 481 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 FBXL18Q96ME1 805 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 SYT17Q9BSW7 474 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 MSTO1Q9BUK6 570 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 FBXO6Q9NRD1 293 aaPredicted RBP14.6□□□□□ -0.07
LIG1-203ENST00000536218 ALG6Q9Y672 507 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 LOXHD1Q8IVV2 1947 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 LSM1O15116 133 aaKnown RBP14.59□□□□□ -0.07
LIG1-203ENST00000536218 TTC4O95801 387 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 GJB1P08034 283 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 CYP11B1P15538 503 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 GARTP22102 1010 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 CA4P22748 312 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 KCTD2Q14681 263 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 SCARA3Q6AZY7 606 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 CCDC62Q6P9F0 684 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 ZDHHC14Q8IZN3 488 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 TMC2Q8TDI7 906 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 SAR1AQ9NR31 198 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 TAS2R1Q9NYW7 299 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 PTTG2Q9NZH5 202 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 CNMDO75829 334 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 ATG7O95352 703 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 GAS8O95995 478 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 GPC5P78333 572 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 CAPN12Q6ZSI9 719 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 SHC3Q92529 594 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 RBAKQ9NYW8 714 aaPredicted RBP14.59□□□□□ -0.07
LIG1-203ENST00000536218 PTPRJQ12913 1337 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 SMIM31A0A1B0GVY4 71 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 POC1B-GALNT4F8VUJ3 575 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 EXTL3O43909 919 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 CDH16O75309 829 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 PIK3CAP42336 1068 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 GPC3P51654 580 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 FMO1Q01740 532 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 PLEKHG4Q58EX7 1191 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 GJC2Q5T442 439 aaPredicted RBP14.59□□□□□ -0.07
LIG1-203ENST00000536218 SLC15A3Q8IY34 581 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 RFWD2Q8NHY2 731 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 CLPTM1LQ96KA5 538 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 PPP1R16BQ96T49 567 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 PDGFCQ9NRA1 345 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 AAASQ9NRG9 546 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 C1orf112Q9NSG2 853 aa14.59□□□□□ -0.07
LIG1-203ENST00000536218 NOCTQ9UK39 431 aaKnown RBP14.59□□□□□ -0.07
LIG1-203ENST00000536218 FAF1Q9UNN5 650 aaPredicted RBP14.59□□□□□ -0.07
LIG1-203ENST00000536218 TMEM247A6NEH6 219 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.58□□□□□ -0.08
LIG1-203ENST00000536218 TROVE2P10155 538 aaKnown RBP eCLIP14.58□□□□□ -0.08
LIG1-203ENST00000536218 ATP6V1B1P15313 513 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 LMNB2Q03252 620 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 CAPSQ13938 189 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 KCTD21Q4G0X4 260 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 MDH1BQ5I0G3 518 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 C6orf163Q5TEZ5 329 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 TMEM53Q6P2H8 277 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 RAPH1Q70E73 1250 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 MMP19Q99542 508 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 CCDC77Q9BR77 488 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 ALG13Q9NP73 1137 aaKnown RBP14.58□□□□□ -0.08
LIG1-203ENST00000536218 GRID1Q9ULK0 1009 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 CLEC11AQ9Y240 323 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 DIS3Q9Y2L1 958 aaKnown RBP14.58□□□□□ -0.08
LIG1-203ENST00000536218 ADCY3O60266 1144 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 CAPN15O75808 1086 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 HLA-DRAP01903 254 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 EPHX2P34913 555 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 COILP38432 576 aaPredicted RBP14.58□□□□□ -0.08
LIG1-203ENST00000536218 OSTNP61366 133 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 AP2B1P63010 937 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 IGBP1P78318 339 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 WDR44Q5JSH3 913 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 SEL1L2Q5TEA6 688 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 FAM160B1Q5W0V3 765 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 KLHL35Q6PF15 583 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 C1orf228Q6PIY5 440 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 TREML1Q86YW5 311 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 PSPC1Q8WXF1 523 aaKnown RBP14.58□□□□□ -0.08
LIG1-203ENST00000536218 ARMCX1Q9P291 453 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms