RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 NUDT18Q6ZVK8 323 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 CHPFQ8IZ52 775 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 PHTF2Q8N3S3 785 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 DCBLD1Q8N8Z6 715 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 C2orf15Q8WU43 125 aaKnown RBP11.4□□□□□ -0.58
CSDE1-215ENST00000533818 HAS1Q92839 578 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 DRC1Q96MC2 740 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 HSD17B14Q9BPX1 270 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 KIFC3Q9BVG8 833 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 C2orf78A6NCI8 922 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 LEFTY2O00292 366 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 SLC9A3R1O14745 358 aaPredicted RBP11.39□□□□□ -0.59
CSDE1-215ENST00000533818 ADH5P11766 374 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 ODC1P11926 461 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 GPR15P49685 360 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 ERVPABLB-1P60509 514 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 SMARCB1Q12824 385 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 SDHAF4Q5VUM1 108 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 KDM7AQ6ZMT4 941 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 LRRTM3Q86VH5 581 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 GATAD2AQ86YP4 633 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 LSMEM2Q8N112 164 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 FAM26EQ8N5C1 309 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 NAT16Q8N8M0 369 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 SENP8Q96LD8 212 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 ACOX2Q99424 681 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 TCHPQ9BT92 498 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 HCN2Q9UL51 889 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 PCDHA4Q9UN74 947 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 POLQO75417 2590 aa11.39□□□□□ -0.59
CSDE1-215ENST00000533818 TLN1Q9Y490 2541 aaKnown RBP11.38□□□□□ -0.59
CSDE1-215ENST00000533818 K7ERI5 159 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 LAD1O00515 517 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 SCAMP3O14828 347 aaKnown RBP11.38□□□□□ -0.59
CSDE1-215ENST00000533818 SLC27A2O14975 620 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 SGSM2O43147 1006 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 PAPSS1O43252 624 aaPredicted RBP11.38□□□□□ -0.59
CSDE1-215ENST00000533818 MPOP05164 745 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 XRCC6P12956 609 aaKnown RBP eCLIP11.38□□□□□ -0.59
CSDE1-215ENST00000533818 ITGB6P18564 788 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 CHMLP26374 656 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 LRPAP1P30533 357 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 ZXDBP98169 803 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 HDAC1Q13547 482 aaPredicted RBP11.38□□□□□ -0.59
CSDE1-215ENST00000533818 PPP2R5AQ15172 486 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 SLC10A6Q3KNW5 377 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 LINC00303Q3SY05 128 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 EGFLAMQ63HQ2 1017 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 CCDC81Q6ZN84 652 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 METTL3Q86U44 580 aaKnown RBP11.38□□□□□ -0.59
CSDE1-215ENST00000533818 CHD1LQ86WJ1 897 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 FSIP1Q8NA03 581 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 SNX19Q92543 992 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 TRMT2BQ96GJ1 504 aaKnown RBP11.38□□□□□ -0.59
CSDE1-215ENST00000533818 TCEANC2Q96MN5 208 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 ACO2Q99798 780 aaKnown RBP11.38□□□□□ -0.59
CSDE1-215ENST00000533818 ARHGAP9Q9BRR9 750 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 PTPRHQ9HD43 1115 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 ITM2CQ9NQX7 267 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 DEC1Q9P2X7 70 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 RAD54BQ9Y620 910 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 SLCO1B1Q9Y6L6 691 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 CENPEQ02224 2701 aa11.38□□□□□ -0.59
CSDE1-215ENST00000533818 SPTBN1Q01082 2364 aaKnown RBP11.37□□□□□ -0.59
CSDE1-215ENST00000533818 DFNA5O60443 496 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 PRPF40AO75400 957 aaKnown RBP11.37□□□□□ -0.59
CSDE1-215ENST00000533818 MCF2P10911 925 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 HARSP12081 509 aaKnown RBP11.37□□□□□ -0.59
CSDE1-215ENST00000533818 OXTRP30559 389 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 PDE6CP51160 858 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 RCAN1P53805 252 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 GABREP78334 506 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 SPAG1Q07617 926 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 ILKQ13418 452 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 LY6G5CQ5SRR4 150 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 BTBD8Q5XKL5 378 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 DHX32Q7L7V1 743 aaKnown RBP11.37□□□□□ -0.59
CSDE1-215ENST00000533818 KIAA1958Q8N8K9 716 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 MYRFLQ96LU7 910 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 GABRG3Q99928 467 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 RPF1Q9H9Y2 349 aaKnown RBP11.37□□□□□ -0.59
CSDE1-215ENST00000533818 SH3GLB2Q9NR46 395 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 USP36Q9P275 1121 aaKnown RBP11.37□□□□□ -0.59
CSDE1-215ENST00000533818 PLEKHB1Q9UF11 243 aaPredicted RBP11.37□□□□□ -0.59
CSDE1-215ENST00000533818 STARD13Q9Y3M8 1113 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 PCDHB6Q9Y5E3 794 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 PCDHB5Q9Y5E4 795 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 PCDHB1Q9Y5F3 818 aa11.37□□□□□ -0.59
CSDE1-215ENST00000533818 MYO18AQ92614 2054 aaKnown RBP11.37□□□□□ -0.59
CSDE1-215ENST00000533818 KCNJ18B7U540 433 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 TULP3O75386 442 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 DXOO77932 396 aaKnown RBP11.36□□□□□ -0.59
CSDE1-215ENST00000533818 NOL4O94818 638 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 BAG4O95429 457 aaKnown RBP11.36□□□□□ -0.59
CSDE1-215ENST00000533818 MT-CO3P00414 261 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 ITGAVP06756 1048 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 SFTPCP11686 197 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 ELAVL4P26378 380 aaKnown RBP11.36□□□□□ -0.59
CSDE1-215ENST00000533818 AFMP43652 599 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms