RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 USP27XA6NNY8 438 aa20.06■□□□□ 0.8
SMPD1-205ENST00000531303 HHLA1C9JL84 531 aa20.06■□□□□ 0.8
SMPD1-205ENST00000531303 ZSCAN12O43309 604 aa20.06■□□□□ 0.8
SMPD1-205ENST00000531303 CLASP2O75122 1294 aaKnown RBP20.06■□□□□ 0.8
SMPD1-205ENST00000531303 GLUD1P00367 558 aa20.06■□□□□ 0.8
SMPD1-205ENST00000531303 TUFMP49411 452 aaKnown RBP20.06■□□□□ 0.8
SMPD1-205ENST00000531303 TKTL1P51854 596 aa20.06■□□□□ 0.8
SMPD1-205ENST00000531303 RPL10AP62906 217 aaKnown RBP20.06■□□□□ 0.8
SMPD1-205ENST00000531303 GPC5P78333 572 aa20.06■□□□□ 0.8
SMPD1-205ENST00000531303 ADGRD2Q7Z7M1 963 aa20.06■□□□□ 0.8
SMPD1-205ENST00000531303 SIX6OS1Q8N1H7 587 aa20.06■□□□□ 0.8
SMPD1-205ENST00000531303 SCAMP5Q8TAC9 235 aa20.06■□□□□ 0.8
SMPD1-205ENST00000531303 NDRG1Q92597 394 aaKnown RBP20.06■□□□□ 0.8
SMPD1-205ENST00000531303 C8orf48Q96LL4 319 aa20.06■□□□□ 0.8
SMPD1-205ENST00000531303 DUSP10Q9Y6W6 482 aa20.06■□□□□ 0.8
SMPD1-205ENST00000531303 GJB6O95452 261 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 ABL1P00519 1130 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 TMEM253P0C7T8 217 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 ACADSBP45954 432 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 KIF5AQ12840 1032 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 PTPROQ16827 1216 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 PRPF38BQ5VTL8 546 aaKnown RBP20.05■□□□□ 0.8
SMPD1-205ENST00000531303 LILRA6Q6PI73 481 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 FAM183BPQ6ZVS7 135 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 TMEM110Q86TL2 294 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 CCAR2Q8N163 923 aaKnown RBP20.05■□□□□ 0.8
SMPD1-205ENST00000531303 KIAA1524Q8TCG1 905 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 CLEC4CQ8WTT0 213 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 KCTD13Q8WZ19 329 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 TRIM11Q96F44 468 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 VCPIP1Q96JH7 1222 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 UBXN6Q9BZV1 441 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 PRDM12Q9H4Q4 367 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 INTUQ9ULD6 942 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 YIPF1Q9Y548 306 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 MTCL1Q9Y4B5 1905 aaKnown RBP20.05■□□□□ 0.8
SMPD1-205ENST00000531303 PATJQ8NI35 1801 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 PAPSS1O43252 624 aaPredicted RBP20.05■□□□□ 0.8
SMPD1-205ENST00000531303 USP17L7P0C7H9 530 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 MYBL1P10243 752 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 GABRB2P47870 512 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 CLCN4P51793 760 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 SLC5A3P53794 718 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 SNX16P57768 344 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 XYLT1Q86Y38 959 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 TCEAL8Q8IYN2 117 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 KREMEN2Q8NCW0 462 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 SLC7A14Q8TBB6 771 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 MRPL38Q96DV4 380 aaKnown RBP20.05■□□□□ 0.8
SMPD1-205ENST00000531303 ULBP1Q9BZM6 244 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 TLE6Q9H808 572 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 STRIP2Q9ULQ0 834 aa20.05■□□□□ 0.8
SMPD1-205ENST00000531303 SOX1O00570 391 aaPredicted RBP20.04■□□□□ 0.8
SMPD1-205ENST00000531303 EPCAMP16422 314 aa20.04■□□□□ 0.8
SMPD1-205ENST00000531303 ATF6P18850 670 aa20.04■□□□□ 0.8
SMPD1-205ENST00000531303 NOP2P46087 812 aaKnown RBP20.04■□□□□ 0.8
SMPD1-205ENST00000531303 ALDH1A3P47895 512 aa20.04■□□□□ 0.8
SMPD1-205ENST00000531303 RPL34P49207 117 aaKnown RBP20.04■□□□□ 0.8
SMPD1-205ENST00000531303 NAP1L1P55209 391 aaKnown RBP20.04■□□□□ 0.8
SMPD1-205ENST00000531303 TWF1Q12792 350 aa20.04■□□□□ 0.8
SMPD1-205ENST00000531303 MTMR3Q13615 1198 aa20.04■□□□□ 0.8
SMPD1-205ENST00000531303 DNAJC24Q6P3W2 148 aa20.04■□□□□ 0.8
SMPD1-205ENST00000531303 REXO1L1PQ8IX06 675 aa20.04■□□□□ 0.8
SMPD1-205ENST00000531303 NUP93Q8N1F7 819 aa20.04■□□□□ 0.8
SMPD1-205ENST00000531303 TXLNBQ8N3L3 684 aa20.04■□□□□ 0.8
SMPD1-205ENST00000531303 TTYH1Q9H313 450 aaPredicted RBP20.04■□□□□ 0.8
SMPD1-205ENST00000531303 CTTNBP2NLQ9P2B4 639 aa20.04■□□□□ 0.8
SMPD1-205ENST00000531303 FBXW11Q9UKB1 542 aa20.04■□□□□ 0.8
SMPD1-205ENST00000531303 GUCA1BQ9UMX6 200 aa20.04■□□□□ 0.8
SMPD1-205ENST00000531303 PAXBP1Q9Y5B6 917 aa20.04■□□□□ 0.8
SMPD1-205ENST00000531303 INSL5Q9Y5Q6 135 aa20.04■□□□□ 0.8
SMPD1-205ENST00000531303 GREB1Q4ZG55 1949 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 MACROD2A1Z1Q3 448 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 TNFRSF10BO14763 440 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 PJA2O43164 708 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 GRAP2O75791 330 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 CYP1A2P05177 515 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 ARHGAP25P42331 645 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 NRIP1P48552 1158 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 RNASE9P60153 205 aaKnown RBP20.03■□□□□ 0.8
SMPD1-205ENST00000531303 ZNF268Q14587 947 aaPredicted RBP20.03■□□□□ 0.8
SMPD1-205ENST00000531303 ARHGAP29Q52LW3 1261 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 RAB41Q5JT25 222 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 FAM102AQ5T9C2 384 aaPredicted RBP20.03■□□□□ 0.8
SMPD1-205ENST00000531303 SLC35G2Q8TBE7 412 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 LRCH3Q96II8 777 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 PIWIL1Q96J94 861 aaKnown RBP20.03■□□□□ 0.8
SMPD1-205ENST00000531303 NUP85Q9BW27 656 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 IGFLR1Q9H665 355 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 PNPLA8Q9NP80 782 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 CYLDQ9NQC7 956 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 HSFX1Q9UBD0 423 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 MAFFQ9ULX9 164 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 MAGED2Q9UNF1 606 aaPredicted RBP20.03■□□□□ 0.8
SMPD1-205ENST00000531303 ZNF638Q14966 1978 aaKnown RBP20.03■□□□□ 0.8
SMPD1-205ENST00000531303 MYO16Q9Y6X6 1858 aa20.03■□□□□ 0.8
SMPD1-205ENST00000531303 SLC38A8A6NNN8 435 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 BUB1O43683 1085 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 C8AP07357 584 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 GTF2F1P35269 517 aaKnown RBP eCLIP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms