RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 NBEAL1Q6ZS30 2694 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 A0A0A0MRY4 1105 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 A0A1B0GTQ1 180 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 TBC1D3BA6NDS4 549 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 SMCO2A6NFE2 343 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 OR6C75A6NL08 312 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.26□□□□□ -1.09
CLDND1-229ENST00000513988 RNF223E7ERA6 249 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 N4BP3O15049 544 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 MSH4O15457 936 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 ANP32CO43423 234 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 CYP17A1P05093 508 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 CKMP06732 381 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 USP17L7P0C7H9 530 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 CKMT2P17540 419 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 ATP2B1P20020 1258 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 CTSKP43235 329 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 TUFMP49411 452 aaKnown RBP8.26□□□□□ -1.09
CLDND1-229ENST00000513988 CLK2P49760 499 aaKnown RBP8.26□□□□□ -1.09
CLDND1-229ENST00000513988 CDR1P51861 262 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 SOX4Q06945 474 aaPredicted RBP8.26□□□□□ -1.09
CLDND1-229ENST00000513988 CAPSQ13938 189 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 KMT5BQ4FZB7 885 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 LAYNQ6UX15 382 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 ADAT2Q7Z6V5 191 aaKnown RBP8.26□□□□□ -1.09
CLDND1-229ENST00000513988 TMEM150AQ86TG1 271 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 ZNF654Q8IZM8 581 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 MMP21Q8N119 569 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 OTUD7AQ8TE49 926 aaPredicted RBP8.26□□□□□ -1.09
CLDND1-229ENST00000513988 SH3RF2Q8TEC5 729 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 PIGOQ8TEQ8 1089 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 GIPC2Q8TF65 315 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 MIB2Q96AX9 1013 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 DEPDC7Q96QD5 511 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 ADPGKQ9BRR6 497 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 ADNPQ9H2P0 1102 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 TMEM206Q9H813 350 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 TRPC7Q9HCX4 862 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 SLC38A7Q9NVC3 462 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 TRIP11Q15643 1979 aa8.26□□□□□ -1.09
CLDND1-229ENST00000513988 TRAV19A0A0A6YYK7 116 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 SMIM28A0A1B0GU29 152 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 S1PR4O95977 384 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 F11P03951 625 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 ATF6P18850 670 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 MX1P20591 662 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 CD97P48960 835 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 CLCA4Q14CN2 919 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 MGAT5BQ3V5L5 792 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 SMYD5Q6GMV2 418 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 IGF2-ASQ6U949 168 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 USP37Q86T82 979 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 C12orf40Q86WS4 652 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 CHPFQ8IZ52 775 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 SLC5A5Q92911 643 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 LENG9Q96B70 501 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 PRIMPOLQ96LW4 560 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 NFKBIZQ9BYH8 718 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 PDZD7Q9H5P4 517 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 TM9SF3Q9HD45 589 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 CUEDC1Q9NWM3 386 aaPredicted RBP8.25□□□□□ -1.09
CLDND1-229ENST00000513988 HSFX1Q9UBD0 423 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 SLCO1B1Q9Y6L6 691 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 V9GY48 417 aaPredicted RBP8.25□□□□□ -1.09
CLDND1-229ENST00000513988 HIVEP3Q5T1R4 2406 aa8.25□□□□□ -1.09
CLDND1-229ENST00000513988 ZFC3H1O60293 1989 aaKnown RBP8.24□□□□□ -1.09
CLDND1-229ENST00000513988 OBSL1O75147 1896 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 DKC1O60832 514 aaKnown RBP eCLIP8.24□□□□□ -1.09
CLDND1-229ENST00000513988 CSO75390 466 aaKnown RBP8.24□□□□□ -1.09
CLDND1-229ENST00000513988 OAZ2O95190 189 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 LARGE1O95461 756 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 RNF224P0DH78 156 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 OXTRP30559 389 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 RPL9P32969 192 aaKnown RBP8.24□□□□□ -1.09
CLDND1-229ENST00000513988 DUSP3P51452 185 aaPredicted RBP8.24□□□□□ -1.09
CLDND1-229ENST00000513988 C21orf59P57076 290 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 ORC1Q13415 861 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 DHCR24Q15392 516 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 C3orf38Q5JPI3 329 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 KCNT1Q5JUK3 1230 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 C10orf76Q5T2E6 689 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 KANSL1Q7Z3B3 1105 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 ASAP3Q8TDY4 903 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 SAP25Q8TEE9 199 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 GJA10Q969M2 543 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 SLC46A1Q96NT5 459 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 CYP2S1Q96SQ9 504 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 CD248Q9HCU0 757 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 PRMT7Q9NVM4 692 aaPredicted RBP8.24□□□□□ -1.09
CLDND1-229ENST00000513988 USP36Q9P275 1121 aaKnown RBP8.24□□□□□ -1.09
CLDND1-229ENST00000513988 DDX19BQ9UMR2 479 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 SATB2Q9UPW6 733 aa8.24□□□□□ -1.09
CLDND1-229ENST00000513988 TIMM13Q9Y5L4 95 aaPredicted RBP8.24□□□□□ -1.09
CLDND1-229ENST00000513988 AKAP9Q99996 3911 aa8.23□□□□□ -1.09
CLDND1-229ENST00000513988 SDK2Q58EX2 2172 aa8.23□□□□□ -1.09
CLDND1-229ENST00000513988 MTSS1O43312 755 aa8.23□□□□□ -1.09
CLDND1-229ENST00000513988 DDAH2O95865 285 aa8.23□□□□□ -1.09
CLDND1-229ENST00000513988 ADH1CP00326 375 aa8.23□□□□□ -1.09
CLDND1-229ENST00000513988 ACP1P24666 158 aa8.23□□□□□ -1.09
CLDND1-229ENST00000513988 CIITAP33076 1130 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms