RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ZNF560Q96MR9 790 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.79□□□□□ -0.36
LIN54-206ENST00000506560 KIAA1257Q9ULG3 409 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 KPNA6O60684 536 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 HUS1O60921 280 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 TJP3O95049 919 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 IFNB1P01574 187 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 CAPN2P17655 700 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 SLCO1A2P46721 670 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 NDUFV1P49821 464 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 SLC6A3Q01959 620 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 PLCB3Q01970 1234 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 GAD2Q05329 585 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 CALCOCO2Q13137 446 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 LPIN1Q14693 890 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 OASLQ15646 514 aaKnown RBP12.79□□□□□ -0.36
LIN54-206ENST00000506560 P3H1Q32P28 736 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 HP1BP3Q5SSJ5 553 aaPredicted RBP12.79□□□□□ -0.36
LIN54-206ENST00000506560 ARHGAP17Q68EM7 881 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 POLNQ7Z5Q5 900 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 KCTD6Q8NC69 237 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 B3GALNT2Q8NCR0 500 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 FAM172AQ8WUF8 416 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 RHOBTB2Q9BYZ6 727 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 TRPV6Q9H1D0 765 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 ADAM7Q9H2U9 754 aa12.79□□□□□ -0.36
LIN54-206ENST00000506560 PABPC3Q9H361 631 aaKnown RBP12.79□□□□□ -0.36
LIN54-206ENST00000506560 FOXO6A8MYZ6 492 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 RNF8O76064 485 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 ACSL3O95573 720 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 GAS8O95995 478 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 MYCP01106 439 aaPredicted RBP12.78□□□□□ -0.36
LIN54-206ENST00000506560 ATF2P15336 505 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 LRPAP1P30533 357 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 CACNA2D1P54289 1103 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 ITGA7Q13683 1181 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 SV2CQ496J9 727 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 FOXR1Q6PIV2 292 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 CCDC33Q8N5R6 958 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 ANKRD52Q8NB46 1076 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 MAIP1Q8WWC4 291 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 SNF8Q96H20 258 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 ATP6V1G3Q96LB4 118 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 SENP8Q96LD8 212 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 CNPY3Q9BT09 278 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 CDC42EP4Q9H3Q1 356 aaKnown RBP12.78□□□□□ -0.36
LIN54-206ENST00000506560 CRTAC1Q9NQ79 661 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 TMPRSS4Q9NRS4 437 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 DDX56Q9NY93 547 aaKnown RBP12.78□□□□□ -0.36
LIN54-206ENST00000506560 INPP5FQ9Y2H2 1132 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 ZNF638Q14966 1978 aaKnown RBP12.78□□□□□ -0.36
LIN54-206ENST00000506560 CASP8AP2Q9UKL3 1982 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 TTC3P53804 2025 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 CAND2O75155 1236 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 ITGB1P05556 798 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 CDH6P55285 790 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 HDAC4P56524 1084 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 DEFB115Q30KQ5 88 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 KRT71Q3SY84 523 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 MDH1BQ5I0G3 518 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 IZUMO3Q5VZ72 239 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 ZNF365Q70YC5 407 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 RSPH3Q86UC2 560 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 PIGZQ86VD9 579 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 CMASQ8NFW8 434 aaPredicted RBP12.78□□□□□ -0.36
LIN54-206ENST00000506560 EPS8L3Q8TE67 593 aaKnown RBP12.78□□□□□ -0.36
LIN54-206ENST00000506560 HHIPL1Q96JK4 782 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 ADAM2Q99965 735 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 WHRNQ9P202 907 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 SRRDQ9UH36 339 aa12.78□□□□□ -0.36
LIN54-206ENST00000506560 TLDC2A0PJX2 215 aa12.77□□□□□ -0.36
LIN54-206ENST00000506560 B4GALT3O60512 393 aa12.77□□□□□ -0.36
LIN54-206ENST00000506560 ALDH1A1P00352 501 aa12.77□□□□□ -0.36
LIN54-206ENST00000506560 THP07101 528 aa12.77□□□□□ -0.36
LIN54-206ENST00000506560 KRT7P08729 469 aa12.77□□□□□ -0.36
LIN54-206ENST00000506560 BRCC3P46736 316 aa12.77□□□□□ -0.36
LIN54-206ENST00000506560 BST2Q10589 180 aaKnown RBP12.77□□□□□ -0.36
LIN54-206ENST00000506560 HADHQ16836 314 aaKnown RBP12.77□□□□□ -0.36
LIN54-206ENST00000506560 LRIG3Q6UXM1 1119 aa12.77□□□□□ -0.36
LIN54-206ENST00000506560 RFX6Q8HWS3 928 aa12.77□□□□□ -0.36
LIN54-206ENST00000506560 NETO2Q8NC67 525 aa12.77□□□□□ -0.36
LIN54-206ENST00000506560 CREBZFQ9NS37 354 aa12.77□□□□□ -0.36
LIN54-206ENST00000506560 ASNSD1Q9NWL6 643 aa12.77□□□□□ -0.36
LIN54-206ENST00000506560 MTRF1LQ9UGC7 380 aaKnown RBP12.77□□□□□ -0.36
LIN54-206ENST00000506560 NOVA2Q9UNW9 492 aaKnown RBP12.77□□□□□ -0.36
LIN54-206ENST00000506560 MYBPHLA2RUH7 354 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 RIPK2O43353 540 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 XPOTO43592 962 aaKnown RBP12.77□□□□□ -0.37
LIN54-206ENST00000506560 BANF1O75531 89 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 IL4RP24394 825 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 ARSEP51690 589 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 ACLYP53396 1101 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 VCPP55072 806 aaKnown RBP12.77□□□□□ -0.37
LIN54-206ENST00000506560 GUCY1A3Q02108 690 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 ADIGQ0VDE8 80 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 MTMR3Q13615 1198 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 MBTPS1Q14703 1052 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 TRIM71Q2Q1W2 868 aaKnown RBP12.77□□□□□ -0.37
LIN54-206ENST00000506560 SYCP2LQ5T4T6 812 aa12.77□□□□□ -0.37
LIN54-206ENST00000506560 HFE2Q6ZVN8 426 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms