RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 CHORDC1Q9UHD1 332 aaPredicted RBP8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 TMEM59LQ9UK28 342 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 MAFFQ9ULX9 164 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 STAP1Q9ULZ2 295 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 PACSIN2Q9UNF0 486 aaPredicted RBP8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 PCDHB5Q9Y5E4 795 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 PCDHB12Q9Y5F1 795 aa8.54□□□□□ -1.04
TOPBP1-202ENST00000503338 GOLGA6L10A0A0M3HER8 536 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 C2CD4BA6NLJ0 364 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 CCDC188H7C350 402 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 CLDN5O00501 218 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 CEP104O60308 925 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 TBC1D4O60343 1298 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 SRGAP2O75044 1071 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 TADA3O75528 432 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 DAB1O75553 588 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 ZRANB2O95218 330 aaKnown RBP eCLIP8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 EFEMP2O95967 443 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 ACRP10323 421 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 LCP1P13796 627 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 PDGFRAP16234 1089 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 BDNFP23560 247 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 SDC4P31431 198 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 RFC1P35251 1148 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 PTPN9P43378 593 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 PEX5P50542 639 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 TKTL1P51854 596 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 HTRA4P83105 476 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 ADIGQ0VDE8 80 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 GPR17Q13304 367 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 SLC39A12Q504Y0 691 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 TMEM240Q5SV17 173 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 SLC8B1Q6J4K2 584 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 CC2D1AQ6P1N0 951 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 BEND5Q7L4P6 421 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 PHLDB2Q86SQ0 1253 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 DDX53Q86TM3 631 aaKnown RBP8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 SCUBE3Q8IX30 993 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 KATNAL2Q8IYT4 538 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 C7orf61Q8IZ16 206 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 RCOR2Q8IZ40 523 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 FIBCD1Q8N539 461 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 COLGALT1Q8NBJ5 622 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 EXD1Q8NHP7 514 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 COG1Q8WTW3 980 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 BTBD6Q96KE9 485 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 CAPZA3Q96KX2 299 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 C8orf48Q96LL4 319 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 RUNDC3BQ96NL0 473 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 RAD9AQ99638 391 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 SMOQ99835 787 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 ZBED2Q9BTP6 218 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 GOLPH3Q9H4A6 298 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 FBXO44Q9H4M3 255 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 CHST7Q9NS84 486 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 EHD2Q9NZN4 543 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 MTRRQ9UBK8 725 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 MTUS1Q9ULD2 1270 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 SLC4A7Q9Y6M7 1214 aa8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 FNDC1Q4ZHG4 1894 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-202ENST00000503338 UQCRHLA0A096LP55 91 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 NT5C1B-RDH14C9J2C7 533 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 F8W810 466 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 TULP2O00295 520 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 ZNF185O15231 689 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 RTN3O95197 1032 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 ZBED1O96006 694 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 URODP06132 367 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 UQCRHP07919 91 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 CPB1P15086 417 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 MCM3P25205 808 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 CXCR5P32302 372 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 NOS2P35228 1153 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 GRIK1P39086 918 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 MATKP42679 507 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 SSR1P43307 286 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 TUFMP49411 452 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 GLUD2P49448 558 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 DNA2P51530 1060 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 RNASE9P60153 205 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 RPL10AP62906 217 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 YWHAZP63104 245 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 DSG1Q02413 1049 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 PSMD5Q16401 504 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 GLE1Q53GS7 698 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 BOLA3Q53S33 107 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 TPGS2Q68CL5 300 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 PM20D1Q6GTS8 502 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 LLGL2Q6P1M3 1020 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 STRADAQ7RTN6 431 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 LRRTM3Q86VH5 581 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 VSIG1Q86XK7 387 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 PSTKQ8IV42 348 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 ARHGAP18Q8N392 663 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 SPATA4Q8NEY3 305 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 ZMIZ2Q8NF64 920 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 JOSD2Q8TAC2 188 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 RXFP2Q8WXD0 754 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms