RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ARFGAP1Q8N6T3 406 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 EMC1Q8N766 993 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 TMEM40Q8WWA1 233 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 C18orf25Q96B23 403 aaPredicted RBP12.14□□□□□ -0.47
USP46-204ENST00000503060 ACSF2Q96CM8 615 aaPredicted RBP12.14□□□□□ -0.47
USP46-204ENST00000503060 C8orf48Q96LL4 319 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 MRPL45Q9BRJ2 306 aaKnown RBP12.14□□□□□ -0.47
USP46-204ENST00000503060 SEMA4AQ9H3S1 761 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 CNTN3Q9P232 1028 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 SNX9Q9Y5X1 595 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 LRRD1A4D1F6 860 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 A6NNZ2 444 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 LIASO43766 372 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 LRCH4O75427 683 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 SHBGP04278 402 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 MSL3P1P0C860 447 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 CDKN2BP42772 138 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 HNRNPH2P55795 449 aaKnown RBP12.13□□□□□ -0.47
USP46-204ENST00000503060 STILQ15468 1287 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 TUBB8Q3ZCM7 444 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 GLRA4Q5JXX5 417 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 ZNF365Q70YC5 407 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 LRRC52Q8N7C0 313 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 ZFPM2Q8WW38 1151 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 SOCS4Q8WXH5 440 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 KATNAL1Q9BW62 490 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 APOL6Q9BWW8 343 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 LRRC4CQ9HCJ2 640 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 CALCOCO1Q9P1Z2 691 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 TSPAN16Q9UKR8 245 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 PIN4Q9Y237 131 aaKnown RBP12.13□□□□□ -0.47
USP46-204ENST00000503060 GRIN2DO15399 1336 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 TRIP11Q15643 1979 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 C17orf102A2RUQ5 167 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 PRSS47A8MTI9 375 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 KRT7P08729 469 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 ADCY8P40145 1251 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 ITGA8P53708 1063 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 CAV1Q03135 178 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 SLC29A2Q14542 456 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 HADHQ16836 314 aaKnown RBP12.13□□□□□ -0.47
USP46-204ENST00000503060 TFDP3Q5H9I0 405 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 DRICH1Q6PGQ1 229 aaPredicted RBP12.13□□□□□ -0.47
USP46-204ENST00000503060 HOOK3Q86VS8 718 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 ZFYVE28Q9HCC9 887 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 AAASQ9NRG9 546 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 PRKAG2Q9UGJ0 569 aa12.13□□□□□ -0.47
USP46-204ENST00000503060 UBQLN1Q9UMX0 589 aaKnown RBP12.13□□□□□ -0.47
USP46-204ENST00000503060 TNPO2O14787 897 aaKnown RBP12.12□□□□□ -0.47
USP46-204ENST00000503060 EIF3HO15372 352 aaKnown RBP eCLIP12.12□□□□□ -0.47
USP46-204ENST00000503060 PFKMP08237 780 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 AKAP5P24588 427 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 IL1R2P27930 398 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 VPS41P49754 854 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 SH3BGRP55822 239 aaPredicted RBP12.12□□□□□ -0.47
USP46-204ENST00000503060 LMNB2Q03252 620 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 EIF2B5Q13144 721 aaKnown RBP12.12□□□□□ -0.47
USP46-204ENST00000503060 FSCN1Q16658 493 aaKnown RBP12.12□□□□□ -0.47
USP46-204ENST00000503060 GOLGA7BQ2TAP0 167 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 UBAP2Q5T6F2 1119 aaKnown RBP12.12□□□□□ -0.47
USP46-204ENST00000503060 FAM102AQ5T9C2 384 aaPredicted RBP12.12□□□□□ -0.47
USP46-204ENST00000503060 C9orf57Q5W0N0 161 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 TTC19Q6DKK2 380 aaPredicted RBP12.12□□□□□ -0.47
USP46-204ENST00000503060 CCDC25Q86WR0 208 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 ARFGAP2Q8N6H7 521 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 ARL6IP6Q8N6S5 226 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 C12orf29Q8N999 325 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 ZWILCHQ9H900 591 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 ANAPC5Q9UJX4 755 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 DNPEPQ9ULA0 475 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 SCN1AP35498 2009 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 C3orf70A6NLC5 250 aaPredicted RBP12.12□□□□□ -0.47
USP46-204ENST00000503060 RIPK2O43353 540 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 IVLP07476 585 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 SLC10A3P09131 477 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 KLRC2P26717 231 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 HOXC13P31276 330 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 HPDP32754 393 aaPredicted RBP12.12□□□□□ -0.47
USP46-204ENST00000503060 CRYBB1P53674 252 aaPredicted RBP12.12□□□□□ -0.47
USP46-204ENST00000503060 ACAP1Q15027 740 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 UBXN11Q5T124 520 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 TRMT10CQ7L0Y3 403 aaKnown RBP12.12□□□□□ -0.47
USP46-204ENST00000503060 ACOT1Q86TX2 421 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 SAPCD2Q86UD0 394 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 BBOF1Q8ND07 529 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 MIS12Q9H081 205 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 RNF19AQ9NV58 838 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 NOVA2Q9UNW9 492 aaKnown RBP12.12□□□□□ -0.47
USP46-204ENST00000503060 NME7Q9Y5B8 376 aa12.12□□□□□ -0.47
USP46-204ENST00000503060 GNAT1P11488 350 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 HOXC8P31273 242 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 CHKAP35790 457 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 PURAQ00577 322 aaKnown RBP12.11□□□□□ -0.47
USP46-204ENST00000503060 BYSLQ13895 437 aaKnown RBP12.11□□□□□ -0.47
USP46-204ENST00000503060 SMTNL2Q2TAL5 461 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 PPP1R26Q5T8A7 1209 aaPredicted RBP12.11□□□□□ -0.47
USP46-204ENST00000503060 OR6B2Q6IFH4 312 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 FAM183BPQ6ZVS7 135 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 GSTA5Q7RTV2 222 aa12.11□□□□□ -0.47
USP46-204ENST00000503060 TLCD1Q96CP7 247 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms