RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 ATP2B1P20020 1258 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 MAOBP27338 520 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 GRK6P43250 576 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 NAMPTP43490 491 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 EFNA5P52803 228 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 NUCB1Q02818 461 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 DMP1Q13316 513 aaPredicted RBP10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 PPP2R5AQ15172 486 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 PTPRNQ16849 979 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 INF2Q27J81 1249 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 HLA-BQ31612 363 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 INAVAQ3KP66 663 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 SLC39A12Q504Y0 691 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 CREB3L3Q68CJ9 461 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 ZNF574Q6ZN55 896 aaPredicted RBP10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 SMC5Q8IY18 1101 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 EIF2AK1Q9BQI3 630 aaKnown RBP10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 SLC26A6Q9BXS9 759 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 MIR1-1HGQ9H1L0 117 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 CDT1Q9H211 546 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 SH3GLB2Q9NR46 395 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 ARHGEF4Q9NR80 690 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 KCNK4Q9NYG8 393 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 MAGED2Q9UNF1 606 aaPredicted RBP10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 BTBD3Q9Y2F9 522 aa10.38□□□□□ -0.75
SMARCAL1-213ENST00000496037 STK36Q9NRP7 1315 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 HELZP42694 1942 aaKnown RBP10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 CEP192Q8TEP8 1941 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 BRINP1O60477 761 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 BAG4O95429 457 aaKnown RBP10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 HOXB2P14652 356 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 GSPT1P15170 499 aaKnown RBP10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 TYMPP19971 482 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 EIF2DP41214 584 aaKnown RBP10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 MYO1EQ12965 1108 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 RESTQ13127 1097 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 RTP5Q14D33 572 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 NT5DC1Q5TFE4 455 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 EMC10Q5UCC4 262 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 DBX2Q6ZNG2 339 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 SFTPA1Q8IWL2 248 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 SH3RF2Q8TEC5 729 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 PIGOQ8TEQ8 1089 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 C2orf15Q8WU43 125 aaKnown RBP10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 BSNDQ8WZ55 320 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 KIFC3Q9BVG8 833 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 RNF26Q9BY78 433 aaPredicted RBP10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 TTC12Q9H892 705 aaPredicted RBP10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 PRDM9Q9NQV7 894 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 UXTQ9UBK9 157 aaPredicted RBP10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 FTSJ1Q9UET6 329 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 TUBGCP4Q9UGJ1 667 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 TNFSF13BQ9Y275 285 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 PAXBP1Q9Y5B6 917 aa10.37□□□□□ -0.75
SMARCAL1-213ENST00000496037 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 BCAT2O15382 392 aaPredicted RBP10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 CCNT1O60563 726 aaKnown RBP10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 KRT38O76015 456 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 ODC1P11926 461 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 GRIA2P42262 883 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 KIR2DL1P43626 348 aaPredicted RBP10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 CDR1P51861 262 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 KDSRQ06136 332 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 KCNB1Q14721 858 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 LAPTM4AQ15012 233 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 TTC22Q5TAA0 569 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 DHX32Q7L7V1 743 aaKnown RBP10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 NEK8Q86SG6 692 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 SLFN12Q8IYM2 578 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 BLIDQ8IZY5 108 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 ZNF513Q8N8E2 541 aaPredicted RBP10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 ZNF248Q8NDW4 579 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 SPPL2BQ8TCT7 592 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 TTC9Q92623 222 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 HAS1Q92839 578 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 IFT74Q96LB3 600 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 LINC00597Q9H2U6 94 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 CPNE5Q9HCH3 593 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 ABI2Q9NYB9 513 aaPredicted RBP10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 FCF1Q9Y324 198 aaKnown RBP10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 PCDHGA1Q9Y5H4 931 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 SPTAN1Q13813 2472 aaKnown RBP10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 BOD1L1Q8NFC6 3051 aa10.36□□□□□ -0.75
SMARCAL1-213ENST00000496037 ZNF638Q14966 1978 aaKnown RBP10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 CYP17A1P05093 508 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 CSH1P0DML2 217 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 CSH2P0DML3 217 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 HAPLN1P10915 354 aaPredicted RBP10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 CDK4P11802 303 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 HARSP12081 509 aaKnown RBP10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 HMGA1P17096 107 aaKnown RBP10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 NDUFV2P19404 249 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 TNFRSF4P43489 277 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 SLC6A11P48066 632 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 AARSP49588 968 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 SMARCB1Q12824 385 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 NFATC3Q12968 1075 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 TARDBPQ13148 414 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 GAB4Q2WGN9 574 aa10.35□□□□□ -0.75
SMARCAL1-213ENST00000496037 TBC1D25Q3MII6 688 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms