RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 ALKQ9UM73 1620 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 TBC1D12O60347 775 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 GLRA3O75311 464 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 TMEM253P0C7T8 217 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 CDC73Q6P1J9 531 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 KRT77Q7Z794 578 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 RNF180Q86T96 592 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 ADGRE3Q9BY15 652 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 CLPBQ9H078 707 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 ARHGEF3Q9NR81 526 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 TARBP1Q13395 1621 aaKnown RBP9.87□□□□□ -0.83
VEGFA-212ENST00000480614 FYNP06241 537 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 ERVK-10P10266 1014 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 SEL1L3Q68CR1 1132 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 DENND1BQ6P3S1 775 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 BCORL1Q5H9F3 1711 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 RPS6KA5O75582 802 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 CYP2C9P11712 490 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 OXCT1P55809 520 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 GSTA3Q16772 222 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 MAGED4Q96JG8 741 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 THUMPD3Q9BV44 507 aaKnown RBP9.87□□□□□ -0.83
VEGFA-212ENST00000480614 ZCCHC2Q9C0B9 1178 aaKnown RBP9.87□□□□□ -0.83
VEGFA-212ENST00000480614 GANQ9H2C0 597 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.87□□□□□ -0.83
VEGFA-212ENST00000480614 TMEM114B3SHH9 223 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 ATP5BP06576 529 aaKnown RBP9.87□□□□□ -0.83
VEGFA-212ENST00000480614 PDGFRBP09619 1106 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 SLC44A5Q8NCS7 719 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 ZNF512BQ96KM6 892 aaPredicted RBP9.87□□□□□ -0.83
VEGFA-212ENST00000480614 MAGEB18Q96M61 343 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 MYO5BQ9ULV0 1848 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 COMTP21964 271 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 CASP1P29466 404 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 NMT1P30419 496 aaKnown RBP9.87□□□□□ -0.83
VEGFA-212ENST00000480614 GPC1P35052 558 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 ALDH7A1P49419 539 aaKnown RBP9.87□□□□□ -0.83
VEGFA-212ENST00000480614 DPYDQ12882 1025 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 RFX8Q6ZV50 586 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 HIC2Q96JB3 615 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 CEP44Q9C0F1 390 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 ABCA6Q8N139 1617 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 NEXMIFQ5QGS0 1516 aa9.87□□□□□ -0.83
VEGFA-212ENST00000480614 TEX28O15482 410 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 MZF1P28698 734 aaPredicted RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 PRDX5P30044 214 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 ITGA8P53708 1063 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 PRKAA2P54646 552 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 CSE1LP55060 971 aaKnown RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 PDIA6Q15084 440 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 INAQ16352 499 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 BARGINQ6ZT62 677 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 SAMD3Q8N6K7 520 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 FAM71DQ8N9W8 422 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 CCDC3Q9BQI4 270 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 LZTS1Q9Y250 596 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 TRIM28Q13263 835 aaKnown RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 SBK1Q52WX2 424 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 C12orf60Q5U649 245 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 BNC2Q6ZN30 1099 aaPredicted RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 ADSSL1Q8N142 457 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 SLC30A5Q8TAD4 765 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 REPS1Q96D71 796 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 ABCA9Q8IUA7 1624 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 IGF2BP3O00425 579 aaKnown RBP eCLIP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 TEX33O43247 280 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 MAGEA10P43363 369 aaPredicted RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 CCNG1P51959 295 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 CHAMP1Q96JM3 812 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 REEP2Q9BRK0 252 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 SPRTNQ9H040 489 aaPredicted RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 KLHL28Q9NXS3 571 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 NCAM1P13591 858 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 NUDT2P50583 147 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 ARID5BQ14865 1188 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 NR1I3Q14994 352 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 CCNI2Q6ZMN8 369 aaPredicted RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 MYO1HQ8N1T3 1032 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 RAD21L1Q9H4I0 556 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 RNF181Q9P0P0 153 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 GRK4P32298 578 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 RENBPP51606 427 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 TFDP3Q5H9I0 405 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 CRAMP1Q96RY5 1269 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 H3BMM5 538 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 LSM8O95777 96 aaKnown RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 UQCRBP14927 111 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 MS4A14Q96JA4 679 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 ATF5Q9Y2D1 282 aaPredicted RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 O00370 1275 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 EPB42P16452 691 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 PSMC3P17980 439 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 CHRM3P20309 590 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 GTF2E2P29084 291 aaKnown RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 IFNGR2P38484 337 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 GYS2P54840 703 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 TAF1CQ15572 869 aaPredicted RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 NDUFA5Q16718 116 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 MGAT5BQ3V5L5 792 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 TRIQKQ629K1 86 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms