RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 HEBP1Q9NRV9 189 aa20.04■□□□□ 0.8
PTCD3-210ENST00000473829 SAMSN1Q9NSI8 373 aaKnown RBP20.04■□□□□ 0.8
PTCD3-210ENST00000473829 TDP1Q9NUW8 608 aa20.04■□□□□ 0.8
PTCD3-210ENST00000473829 EHD2Q9NZN4 543 aa20.04■□□□□ 0.8
PTCD3-210ENST00000473829 TRPM5Q9NZQ8 1165 aa20.04■□□□□ 0.8
PTCD3-210ENST00000473829 TRAV19A0A0A6YYK7 116 aa20.03■□□□□ 0.8
PTCD3-210ENST00000473829 FAM92AA1XBS5 289 aa20.03■□□□□ 0.8
PTCD3-210ENST00000473829 ZNF263O14978 683 aa20.03■□□□□ 0.8
PTCD3-210ENST00000473829 CKMP06732 381 aa20.03■□□□□ 0.8
PTCD3-210ENST00000473829 PGFP49763 221 aa20.03■□□□□ 0.8
PTCD3-210ENST00000473829 STARD6P59095 220 aa20.03■□□□□ 0.8
PTCD3-210ENST00000473829 APBA1Q02410 837 aa20.03■□□□□ 0.8
PTCD3-210ENST00000473829 ARHGAP17Q68EM7 881 aa20.03■□□□□ 0.8
PTCD3-210ENST00000473829 YAF2Q8IY57 180 aa20.03■□□□□ 0.8
PTCD3-210ENST00000473829 IRF7Q92985 503 aa20.03■□□□□ 0.8
PTCD3-210ENST00000473829 SLITRK1Q96PX8 696 aa20.03■□□□□ 0.8
PTCD3-210ENST00000473829 DUSP16Q9BY84 665 aa20.03■□□□□ 0.8
PTCD3-210ENST00000473829 FOXQ1Q9C009 403 aa20.03■□□□□ 0.8
PTCD3-210ENST00000473829 GMIPQ9P107 970 aa20.03■□□□□ 0.8
PTCD3-210ENST00000473829 MIA3Q5JRA6 1907 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 RNF225M0QZC1 329 aaPredicted RBP20.02■□□□□ 0.8
PTCD3-210ENST00000473829 CHADO15335 359 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 OAS1P00973 400 aaKnown RBP20.02■□□□□ 0.8
PTCD3-210ENST00000473829 CALCAP01258 141 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 AOC1P19801 751 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 CD72P21854 359 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 CLCN5P51795 746 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 YWHAEP62258 255 aaKnown RBP20.02■□□□□ 0.8
PTCD3-210ENST00000473829 ZXDBP98169 803 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 GCNT1Q02742 428 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 USP4Q13107 963 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 ZNF268Q14587 947 aaPredicted RBP20.02■□□□□ 0.8
PTCD3-210ENST00000473829 CT47A1Q5JQC4 288 aaPredicted RBP20.02■□□□□ 0.8
PTCD3-210ENST00000473829 MIIPQ5JXC2 388 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 GJB7Q6PEY0 223 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 TRIM65Q6PJ69 517 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 TMEM270Q6UE05 265 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 TPRG1Q6ZUI0 275 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 TTC30AQ86WT1 665 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 DDX23Q9BUQ8 820 aaKnown RBP20.02■□□□□ 0.8
PTCD3-210ENST00000473829 KIF9Q9HAQ2 790 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 TRPV5Q9NQA5 729 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 HCN4Q9Y3Q4 1203 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 NFE2L3Q9Y4A8 694 aa20.02■□□□□ 0.8
PTCD3-210ENST00000473829 OLFM2O95897 454 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 ABL1P00519 1130 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 USP17L7P0C7H9 530 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 HDCP19113 662 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 SLC9A1P19634 815 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 PPP3CCP48454 512 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 PRKCQQ04759 706 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 TNK2Q07912 1038 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 ZNF77Q15935 545 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 MAN2A1Q16706 1144 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 GOLGA7BQ2TAP0 167 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 SASS6Q6UVJ0 657 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 FAM114A1Q8IWE2 563 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 ENOX1Q8TC92 643 aaKnown RBP20.01■□□□□ 0.79
PTCD3-210ENST00000473829 OVCA2Q8WZ82 227 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 TFAP2BQ92481 460 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 ZSWIM1Q9BR11 485 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 DNAI2Q9GZS0 605 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 RNF38Q9H0F5 515 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 PNPLA8Q9NP80 782 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 COMMD8Q9NX08 183 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 CHORDC1Q9UHD1 332 aaPredicted RBP20.01■□□□□ 0.79
PTCD3-210ENST00000473829 MTF2Q9Y483 593 aaPredicted RBP20.01■□□□□ 0.79
PTCD3-210ENST00000473829 PCDHB4Q9Y5E5 795 aa20.01■□□□□ 0.79
PTCD3-210ENST00000473829 MUC6Q6W4X9 2439 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 KCNJ18B7U540 433 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 TULP2O00295 520 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 STK25O00506 426 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 CYP26A1O43174 497 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 ZDHHC11BP0C7U3 371 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 CD19P15391 556 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 ZNF132P52740 706 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 KCNJ12Q14500 433 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 STX1AQ16623 288 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 ARHGAP29Q52LW3 1261 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 SGO2Q562F6 1265 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 RBBP8NLQ8NC74 664 aaPredicted RBP20■□□□□ 0.79
PTCD3-210ENST00000473829 PDZD8Q8NEN9 1154 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 TUBGCP2Q9BSJ2 902 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 ANO10Q9NW15 660 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 GTSE1Q9NYZ3 720 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 TSPAN16Q9UKR8 245 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 ARHGAP26Q9UNA1 814 aa20■□□□□ 0.79
PTCD3-210ENST00000473829 KANSL1LA0AUZ9 987 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 GTPBP10A4D1E9 387 aaKnown RBP19.99■□□□□ 0.79
PTCD3-210ENST00000473829 O00370 1275 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 VDRP11473 427 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 PRKCSHP14314 528 aaPredicted RBP19.99■□□□□ 0.79
PTCD3-210ENST00000473829 PFKLP17858 780 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 RFX1P22670 979 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 PON1P27169 355 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 SOX9P48436 509 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 KIF11P52732 1056 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 CDKAL1Q5VV42 579 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 SNX30Q5VWJ9 437 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 TRIM68Q6AZZ1 485 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms