RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 MRPL44Q9H9J2 332 aaKnown RBP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 RBAKQ9NYW8 714 aaPredicted RBP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 EHD2Q9NZN4 543 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 BCCIPQ9P287 314 aaKnown RBP eCLIP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 L1RE1Q9UN81 338 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 SNX9Q9Y5X1 595 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 CHD6Q8TD26 2715 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 USP24Q9UPU5 2620 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 C2orf78A6NCI8 922 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 TMEM8BA6NDV4 472 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 MYMKA6NI61 221 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 TADA3O75528 432 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 GCNT3O95395 438 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 BMP15O95972 392 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 ABL1P00519 1130 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 TPM3P06753 285 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 TMEM191BP0C7N4 346 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 SPINK2P20155 84 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 CSRP1P21291 193 aaKnown RBP7.4□□□□□ -1.22
CKS1B-205ENST00000473344 ANXA13P27216 316 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 RDXP35241 583 aaKnown RBP7.4□□□□□ -1.22
CKS1B-205ENST00000473344 DDIT3P35638 169 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 GRIK1P39086 918 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 ATXN3P54252 364 aaPredicted RBP7.4□□□□□ -1.22
CKS1B-205ENST00000473344 CYP27A1Q02318 531 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 MYO1EQ12965 1108 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 USP4Q13107 963 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 CRY1Q16526 586 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 CRELD2Q6UXH1 353 aaPredicted RBP7.4□□□□□ -1.22
CKS1B-205ENST00000473344 C4orf50Q6ZRC1 276 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 LPCAT2Q7L5N7 544 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 DYMQ7RTS9 669 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 ZNF720Q7Z2F6 126 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 ADGRF2Q8IZF7 708 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 SYCP3Q8IZU3 236 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 PGBD3Q8N328 593 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 CCDC33Q8N5R6 958 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 LRRC52Q8N7C0 313 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 C1orf127Q8N9H9 656 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 MDGA1Q8NFP4 955 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 PIGKQ92643 395 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 EZH1Q92800 747 aaPredicted RBP7.4□□□□□ -1.22
CKS1B-205ENST00000473344 FUBP3Q96I24 572 aaKnown RBP eCLIP7.4□□□□□ -1.22
CKS1B-205ENST00000473344 CNOT6LQ96LI5 555 aaKnown RBP7.4□□□□□ -1.22
CKS1B-205ENST00000473344 SLC22A12Q96S37 553 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 FIZ1Q96SL8 496 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 ST6GALNAC4Q9H4F1 302 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 POLMQ9NP87 494 aaPredicted RBP7.4□□□□□ -1.22
CKS1B-205ENST00000473344 BLOC1S4Q9NUP1 217 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 TRPM5Q9NZQ8 1165 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 MAGEC2Q9UBF1 373 aaPredicted RBP7.4□□□□□ -1.22
CKS1B-205ENST00000473344 ITGA11Q9UKX5 1188 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 MMP17Q9ULZ9 603 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 ARHGAP26Q9UNA1 814 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 STYXL1Q9Y6J8 313 aa7.4□□□□□ -1.22
CKS1B-205ENST00000473344 F5P12259 2224 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 PATE3B3GLJ2 98 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 K7EQS6 105 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 LEFTY2O00292 366 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 CDX4O14627 284 aaPredicted RBP7.39□□□□□ -1.23
CKS1B-205ENST00000473344 SLC9A3R1O14745 358 aaPredicted RBP7.39□□□□□ -1.23
CKS1B-205ENST00000473344 GJB2P29033 226 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 ADSSP30520 456 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 TXLNAP40222 546 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 DPP6P42658 865 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 MAPK8P45983 427 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 ZNF445P59923 1031 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 IRX4P78413 519 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 MRPS21P82921 87 aaKnown RBP7.39□□□□□ -1.23
CKS1B-205ENST00000473344 RBP5P82980 135 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 BYSLQ13895 437 aaKnown RBP7.39□□□□□ -1.23
CKS1B-205ENST00000473344 MAPRE1Q15691 268 aaKnown RBP7.39□□□□□ -1.23
CKS1B-205ENST00000473344 KLHL40Q2TBA0 621 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 TRIM61Q5EBN2 209 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 VSTM1Q6UX27 236 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 CLEC17AQ6ZS10 378 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 DENND5BQ6ZUT9 1274 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 ARMCX6Q7L4S7 300 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 DPH6Q7L8W6 267 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 RASSF3Q86WH2 238 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 SFR1Q86XK3 245 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 CYP4X1Q8N118 509 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 TOP6BLQ8N6T0 577 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 KDF1Q8NAX2 398 aaPredicted RBP7.39□□□□□ -1.23
CKS1B-205ENST00000473344 DEFB124Q8NES8 71 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 SPATA18Q8TC71 538 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 USP33Q8TEY7 942 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 WHAMMQ8TF30 809 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 SAAL1Q96ER3 474 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 ANKRD36BP1Q96IX9 119 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 ACCSQ96QU6 501 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 PNKPQ96T60 521 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 MMS19Q96T76 1030 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 SCNM1Q9BWG6 230 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 PANK2Q9BZ23 570 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 IKZF4Q9H2S9 585 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 LINC00597Q9H2U6 94 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 GDAP2Q9NXN4 497 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 SEL1LQ9UBV2 794 aa7.39□□□□□ -1.23
CKS1B-205ENST00000473344 ZKSCAN5Q9Y2L8 839 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms