RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.57■■□□□ 1.2
RTN4R-205ENST00000469601 KRT82Q9NSB4 513 aa22.57■■□□□ 1.2
RTN4R-205ENST00000469601 TMEM30AQ9NV96 361 aa22.57■■□□□ 1.2
RTN4R-205ENST00000469601 RAB20Q9NX57 234 aa22.57■■□□□ 1.2
RTN4R-205ENST00000469601 DUS2Q9NX74 493 aaKnown RBP22.57■■□□□ 1.2
RTN4R-205ENST00000469601 ARMCX3Q9UH62 379 aaPredicted RBP22.57■■□□□ 1.2
RTN4R-205ENST00000469601 COL4A2P08572 1712 aa22.57■■□□□ 1.2
RTN4R-205ENST00000469601 ABL1P00519 1130 aa22.56■■□□□ 1.2
RTN4R-205ENST00000469601 IFNAR2P48551 515 aa22.56■■□□□ 1.2
RTN4R-205ENST00000469601 SLC7A9P82251 487 aa22.56■■□□□ 1.2
RTN4R-205ENST00000469601 IFRD2Q12894 506 aaPredicted RBP22.56■■□□□ 1.2
RTN4R-205ENST00000469601 DCAF17Q5H9S7 520 aaPredicted RBP22.56■■□□□ 1.2
RTN4R-205ENST00000469601 TTC16Q8NEE8 873 aa22.56■■□□□ 1.2
RTN4R-205ENST00000469601 SH3RF2Q8TEC5 729 aa22.56■■□□□ 1.2
RTN4R-205ENST00000469601 FBXO44Q9H4M3 255 aa22.56■■□□□ 1.2
RTN4R-205ENST00000469601 METTL14Q9HCE5 456 aaKnown RBP22.56■■□□□ 1.2
RTN4R-205ENST00000469601 CSNK1G1Q9HCP0 422 aa22.56■■□□□ 1.2
RTN4R-205ENST00000469601 HPS4Q9NQG7 708 aa22.56■■□□□ 1.2
RTN4R-205ENST00000469601 PRMT8Q9NR22 394 aaPredicted RBP22.56■■□□□ 1.2
RTN4R-205ENST00000469601 CHMP5Q9NZZ3 219 aa22.56■■□□□ 1.2
RTN4R-205ENST00000469601 HMGXB4Q9UGU5 601 aa22.56■■□□□ 1.2
RTN4R-205ENST00000469601 MAN1B1Q9UKM7 699 aa22.56■■□□□ 1.2
RTN4R-205ENST00000469601 PCDHGA2Q9Y5H1 932 aa22.56■■□□□ 1.2
RTN4R-205ENST00000469601 CILPO75339 1184 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 FAM200BP0CF97 657 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 CCDC130P13994 396 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 SLC5A3P53794 718 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 NRLP54845 237 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 GRSF1Q12849 480 aaKnown RBP eCLIP22.55■■□□□ 1.2
RTN4R-205ENST00000469601 NR1H3Q13133 447 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 PON2Q15165 354 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 TRIM68Q6AZZ1 485 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 TXNDC11Q6PKC3 985 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 ASCL5Q7RTU5 278 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 DDX42Q86XP3 938 aaKnown RBP eCLIP22.55■■□□□ 1.2
RTN4R-205ENST00000469601 SPEM1Q8N4L4 309 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 ATRIPQ8WXE1 791 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 CEP63Q96MT8 703 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 HNRNPABQ99729 332 aaKnown RBP22.55■■□□□ 1.2
RTN4R-205ENST00000469601 FAM49BQ9NUQ9 324 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 IL37Q9NZH6 218 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 R4GN57 208 aa22.55■■□□□ 1.2
RTN4R-205ENST00000469601 BICDL2A1A5D9 508 aa22.54■■□□□ 1.2
RTN4R-205ENST00000469601 TNFRSF10BO14763 440 aa22.54■■□□□ 1.2
RTN4R-205ENST00000469601 LMNAP02545 664 aaKnown RBP22.54■■□□□ 1.2
RTN4R-205ENST00000469601 CD58P19256 250 aa22.54■■□□□ 1.2
RTN4R-205ENST00000469601 PMS1P54277 932 aaKnown RBP22.54■■□□□ 1.2
RTN4R-205ENST00000469601 ORC1Q13415 861 aa22.54■■□□□ 1.2
RTN4R-205ENST00000469601 FOXR2Q6PJQ5 311 aa22.54■■□□□ 1.2
RTN4R-205ENST00000469601 C12orf29Q8N999 325 aa22.54■■□□□ 1.2
RTN4R-205ENST00000469601 CYFIP2Q96F07 1278 aa22.54■■□□□ 1.2
RTN4R-205ENST00000469601 ZSCAN32Q9NX65 697 aa22.54■■□□□ 1.2
RTN4R-205ENST00000469601 TICRRQ7Z2Z1 1910 aa22.54■■□□□ 1.2
RTN4R-205ENST00000469601 MIA3Q5JRA6 1907 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 GADD45BO75293 160 aaPredicted RBP22.53■■□□□ 1.2
RTN4R-205ENST00000469601 OLFM2O95897 454 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 OAS1P00973 400 aaKnown RBP22.53■■□□□ 1.2
RTN4R-205ENST00000469601 ARSAP15289 507 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 CXCL12P48061 93 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 TUBP50607 506 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 MAP3K7CLP57077 242 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 UBE2HP62256 183 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 HECTD3Q5T447 861 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 SNX30Q5VWJ9 437 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 ISM2Q6H9L7 571 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 SCAMP5Q8TAC9 235 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 RIN3Q8TB24 985 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 SEMA4DQ92854 862 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 SMOQ99835 787 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 ECT2Q9H8V3 914 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 PNPLA8Q9NP80 782 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 COQ4Q9Y3A0 265 aa22.53■■□□□ 1.2
RTN4R-205ENST00000469601 FAM92AA1XBS5 289 aa22.52■■□□□ 1.2
RTN4R-205ENST00000469601 TRIM49BA6NDI0 452 aa22.52■■□□□ 1.2
RTN4R-205ENST00000469601 LEFTY2O00292 366 aa22.52■■□□□ 1.2
RTN4R-205ENST00000469601 TRDMT1O14717 391 aaKnown RBP22.52■■□□□ 1.2
RTN4R-205ENST00000469601 SLC9A3R1O14745 358 aaPredicted RBP22.52■■□□□ 1.2
RTN4R-205ENST00000469601 NFATC1O95644 943 aa22.52■■□□□ 1.2
RTN4R-205ENST00000469601 ADORA2BP29275 332 aa22.52■■□□□ 1.2
RTN4R-205ENST00000469601 CCINQ13939 588 aa22.52■■□□□ 1.2
RTN4R-205ENST00000469601 MORC3Q14149 939 aa22.52■■□□□ 1.2
RTN4R-205ENST00000469601 FILIP1Q7Z7B0 1213 aa22.52■■□□□ 1.2
RTN4R-205ENST00000469601 TWNKQ96RR1 684 aa22.52■■□□□ 1.2
RTN4R-205ENST00000469601 RNF38Q9H0F5 515 aa22.52■■□□□ 1.2
RTN4R-205ENST00000469601 CPQQ9Y646 472 aa22.52■■□□□ 1.2
RTN4R-205ENST00000469601 WNT6Q9Y6F9 365 aa22.52■■□□□ 1.2
RTN4R-205ENST00000469601 OTOL1A6NHN0 477 aaPredicted RBP22.51■■□□□ 1.19
RTN4R-205ENST00000469601 YWHAEP62258 255 aaKnown RBP22.51■■□□□ 1.19
RTN4R-205ENST00000469601 EML3Q32P44 896 aa22.51■■□□□ 1.19
RTN4R-205ENST00000469601 TMEM196Q5HYL7 178 aa22.51■■□□□ 1.19
RTN4R-205ENST00000469601 ZBTB44Q8NCP5 570 aa22.51■■□□□ 1.19
RTN4R-205ENST00000469601 ZMIZ2Q8NF64 920 aa22.51■■□□□ 1.19
RTN4R-205ENST00000469601 NELL1Q92832 810 aa22.51■■□□□ 1.19
RTN4R-205ENST00000469601 SLC35C1Q96A29 364 aa22.51■■□□□ 1.19
RTN4R-205ENST00000469601 HEXIM2Q96MH2 286 aaKnown RBP22.51■■□□□ 1.19
RTN4R-205ENST00000469601 CISHQ9NSE2 258 aa22.51■■□□□ 1.19
RTN4R-205ENST00000469601 RBM12Q9NTZ6 932 aaKnown RBP22.51■■□□□ 1.19
RTN4R-205ENST00000469601 CHORDC1Q9UHD1 332 aaPredicted RBP22.51■■□□□ 1.19
RTN4R-205ENST00000469601 ATG13O75143 517 aa22.5■■□□□ 1.19
RTN4R-205ENST00000469601 MBL2P11226 248 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms