RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 PLTPP55058 493 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 WSCD1Q658N2 575 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 TRNP1Q6NT89 227 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 OLFML1Q6UWY5 402 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 ZDHHC24Q6UX98 284 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 RTN4RL1Q86UN2 441 aaPredicted RBP15.19■□□□□ 0.02
HDAC6-213ENST00000462730 ANKRD52Q8NB46 1076 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 C3orf58Q8NDZ4 430 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 SLC2A14Q8TDB8 520 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 GRK7Q8WTQ7 553 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 PIK3R5Q8WYR1 880 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 TNIP3Q96KP6 325 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 CCDC114Q96M63 670 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 PAAF1Q9BRP4 392 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 CNPY3Q9BT09 278 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 UBN1Q9NPG3 1134 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 PCSK1NQ9UHG2 260 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 C2CD4BA6NLJ0 364 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 C9IYK1 514 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 NBNO60934 754 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 RNF8O76064 485 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 TJP3O95049 919 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 PDGFRAP16234 1089 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 MIPP30301 263 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 GBP1P32455 592 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 MAGEA9P43362 315 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 CORO7P57737 925 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 SNX16P57768 344 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 ADCY2Q08462 1091 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 GRIK3Q13003 919 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 ACAP1Q15027 740 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 CCNG2Q16589 344 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 SLC24A5Q71RS6 500 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 TMC3Q7Z5M5 1100 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 TMEM110Q86TL2 294 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 STK32AQ8WU08 396 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-213ENST00000462730 C3orf70A6NLC5 250 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-213ENST00000462730 PITPNM1O00562 1244 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 PAPSS1O43252 624 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-213ENST00000462730 OPA1O60313 960 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 GABBR2O75899 941 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 ACAT1P24752 427 aaKnown RBP15.18■□□□□ 0.02
HDAC6-213ENST00000462730 TKTP29401 623 aaKnown RBP15.18■□□□□ 0.02
HDAC6-213ENST00000462730 HSD17B3P37058 310 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 CDKN2BP42772 138 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 SLC6A3Q01959 620 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 DHX9Q08211 1270 aaKnown RBP15.18■□□□□ 0.02
HDAC6-213ENST00000462730 PTK6Q13882 451 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 UPP1Q16831 310 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 TFDP3Q5H9I0 405 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 KCNT1Q5JUK3 1230 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 SYDE1Q6ZW31 735 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-213ENST00000462730 IQCKQ8N0W5 287 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 B3GALNT2Q8NCR0 500 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 ATL2Q8NHH9 583 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 SENP8Q96LD8 212 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 ASIC3Q9UHC3 531 aa15.18■□□□□ 0.02
HDAC6-213ENST00000462730 TSC2P49815 1807 aa15.17■□□□□ 0.02
HDAC6-213ENST00000462730 ATP2C2O75185 946 aa15.17■□□□□ 0.02
HDAC6-213ENST00000462730 TRUB2O95900 331 aaKnown RBP15.17■□□□□ 0.02
HDAC6-213ENST00000462730 GAS8O95995 478 aa15.17■□□□□ 0.02
HDAC6-213ENST00000462730 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-213ENST00000462730 MTMR3Q13615 1198 aa15.17■□□□□ 0.02
HDAC6-213ENST00000462730 GPNMBQ14956 572 aa15.17■□□□□ 0.02
HDAC6-213ENST00000462730 TAF5Q15542 800 aa15.17■□□□□ 0.02
HDAC6-213ENST00000462730 UAP1Q16222 522 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-213ENST00000462730 CCDC142Q17RM4 750 aa15.17■□□□□ 0.02
HDAC6-213ENST00000462730 C15orf59Q2T9L4 293 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-213ENST00000462730 SH3PXD2AQ5TCZ1 1133 aa15.17■□□□□ 0.02
HDAC6-213ENST00000462730 SCUBE3Q8IX30 993 aa15.17■□□□□ 0.02
HDAC6-213ENST00000462730 FBXO25Q8TCJ0 367 aa15.17■□□□□ 0.02
HDAC6-213ENST00000462730 SH3GL2Q99962 352 aa15.17■□□□□ 0.02
HDAC6-213ENST00000462730 FTHL17Q9BXU8 183 aa15.17■□□□□ 0.02
HDAC6-213ENST00000462730 USP18Q9UMW8 372 aa15.17■□□□□ 0.02
HDAC6-213ENST00000462730 PLAAQ9Y263 795 aa15.17■□□□□ 0.02
HDAC6-213ENST00000462730 DPYSL4O14531 572 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 FAM163BP0C2L3 166 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 LCP1P13796 627 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 PTPN1P18031 435 aaKnown RBP15.16■□□□□ 0.02
HDAC6-213ENST00000462730 RPL9P32969 192 aaKnown RBP15.16■□□□□ 0.02
HDAC6-213ENST00000462730 PCK1P35558 622 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 TRIP13Q15645 432 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-213ENST00000462730 CDO1Q16878 200 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 DNAJC21Q5F1R6 531 aaKnown RBP15.16■□□□□ 0.02
HDAC6-213ENST00000462730 DSTYKQ6XUX3 929 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 ZDHHC17Q8IUH5 632 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 UBLCP1Q8WVY7 318 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-213ENST00000462730 HSPH1Q92598 858 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 HAUS1Q96CS2 278 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 ZNF333Q96JL9 665 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 PEBP4Q96S96 227 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 B3GNT5Q9BYG0 378 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 CRISPLD2Q9H0B8 497 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 BCCIPQ9P287 314 aaKnown RBP eCLIP15.16■□□□□ 0.02
HDAC6-213ENST00000462730 GOLGA8KD6RF30 607 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 INPPL1O15357 1258 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 LIASO43766 372 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 PPFIA2O75334 1257 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 EOMESO95936 686 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms