RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 SLIT1O75093 1534 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 FAM95CA0A1B0GW59 222 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 FCHO1O14526 889 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 HIST1H2AGP0C0S8 130 aaPredicted RBP12.46□□□□□ -0.41
SEC16A-207ENST00000453963 HIST1H2ADP20671 130 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 OASLQ15646 514 aaKnown RBP12.46□□□□□ -0.41
SEC16A-207ENST00000453963 EARS2Q5JPH6 523 aaKnown RBP12.46□□□□□ -0.41
SEC16A-207ENST00000453963 FAXCQ5TGI0 409 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 ATF7IP2Q5U623 682 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 IER5Q5VY09 327 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 SEL1L3Q68CR1 1132 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 NUDT18Q6ZVK8 323 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 OPTNQ96CV9 577 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 HIST1H2AHQ96KK5 128 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 ZDHHC15Q96MV8 337 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 TRAPPC9Q96Q05 1148 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 HIST1H2AJQ99878 128 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 H2AFJQ9BTM1 129 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 RNPEPL1Q9HAU8 725 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 NINJ2Q9NZG7 142 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 DDX3XO00571 662 aaKnown RBP eCLIP12.46□□□□□ -0.41
SEC16A-207ENST00000453963 ZNF263O14978 683 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 NDUFS3O75489 264 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 LSM8O95777 96 aaKnown RBP12.46□□□□□ -0.41
SEC16A-207ENST00000453963 SERPINB5P36952 375 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 CAP2P40123 477 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 VCPP55072 806 aaKnown RBP12.46□□□□□ -0.41
SEC16A-207ENST00000453963 MRPL28Q13084 256 aaKnown RBP12.46□□□□□ -0.41
SEC16A-207ENST00000453963 Q4G0T1 1027 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 ERMARDQ5T6L9 678 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 KDELC2Q7Z4H8 507 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 P3H2Q8IVL5 708 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 USP33Q8TEY7 942 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 SIK3Q9Y2K2 1263 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 CYBBP04839 570 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 CTSHP09668 335 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 TGM2P21980 687 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 DENND1BQ6P3S1 775 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 RAB42Q8N4Z0 105 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 RIN3Q8TB24 985 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 SLC5A5Q92911 643 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 MIEF2Q96C03 454 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 CATSPER2Q96P56 530 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 TMEM121Q9BTD3 319 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 RIOX1Q9H6W3 641 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 PRMT7Q9NVM4 692 aaPredicted RBP12.46□□□□□ -0.41
SEC16A-207ENST00000453963 SNX13Q9Y5W8 968 aa12.46□□□□□ -0.41
SEC16A-207ENST00000453963 ZSCAN9O15535 394 aaPredicted RBP12.46□□□□□ -0.42
SEC16A-207ENST00000453963 FAM58BPP0C7Q3 252 aa12.46□□□□□ -0.42
SEC16A-207ENST00000453963 EPHB2P29323 1055 aa12.46□□□□□ -0.42
SEC16A-207ENST00000453963 GRIK1P39086 918 aa12.46□□□□□ -0.42
SEC16A-207ENST00000453963 MTFR1Q15390 333 aa12.46□□□□□ -0.42
SEC16A-207ENST00000453963 CCDC85BQ15834 202 aaPredicted RBP12.46□□□□□ -0.42
SEC16A-207ENST00000453963 TRIM60Q495X7 471 aa12.46□□□□□ -0.42
SEC16A-207ENST00000453963 IYDQ6PHW0 289 aa12.46□□□□□ -0.42
SEC16A-207ENST00000453963 ACER1Q8TDN7 264 aa12.46□□□□□ -0.42
SEC16A-207ENST00000453963 FAM162AQ96A26 154 aa12.46□□□□□ -0.42
SEC16A-207ENST00000453963 SIKE1Q9BRV8 207 aa12.46□□□□□ -0.42
SEC16A-207ENST00000453963 MYLK2Q9H1R3 596 aa12.46□□□□□ -0.42
SEC16A-207ENST00000453963 ERAP1Q9NZ08 941 aa12.46□□□□□ -0.42
SEC16A-207ENST00000453963 FAM32AQ9Y421 112 aaKnown RBP12.46□□□□□ -0.42
SEC16A-207ENST00000453963 CD4P01730 458 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 RARAP10276 462 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 AGAP9Q5VTM2 703 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 TTC30BQ8N4P2 665 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 UBA3Q8TBC4 463 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 CKAP2Q8WWK9 683 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 IL1RL2Q9HB29 575 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 CYP39A1Q9NYL5 469 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 APPL1Q9UKG1 709 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 COL3A1P02461 1466 aaPredicted RBP12.45□□□□□ -0.42
SEC16A-207ENST00000453963 ZC3H13Q5T200 1668 aaKnown RBP12.45□□□□□ -0.42
SEC16A-207ENST00000453963 DIP2BQ9P265 1576 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 HBP1O60381 514 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 TPST1O60507 370 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 PDPK2PQ6A1A2 396 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 SLC47A2Q86VL8 602 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 TCP10LQ8TDR4 215 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 SLC35C1Q96A29 364 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 OXNAD1Q96HP4 312 aaPredicted RBP12.45□□□□□ -0.42
SEC16A-207ENST00000453963 ZFRQ96KR1 1074 aaKnown RBP12.45□□□□□ -0.42
SEC16A-207ENST00000453963 LRRC40Q9H9A6 602 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 ZNF556Q9HAH1 456 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 KIAA1257Q9ULG3 409 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 TCRBV5S4A2TA0A5A2 114 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 ANXA9O76027 345 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 PYGMP11217 842 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 PEX5P50542 639 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 C1QBPQ07021 282 aaKnown RBP12.45□□□□□ -0.42
SEC16A-207ENST00000453963 SLC45A4Q5BKX6 768 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 TXNRD3Q86VQ6 643 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 ACTL9Q8TC94 416 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 VPS50Q96JG6 964 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 PNMA5Q96PV4 448 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.45□□□□□ -0.42
SEC16A-207ENST00000453963 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.45□□□□□ -0.42
SEC16A-207ENST00000453963 SYNDIG1LA6NDD5 238 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 CYP2C9P11712 490 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 CPA3P15088 417 aa12.45□□□□□ -0.42
SEC16A-207ENST00000453963 PRKCIP41743 596 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms