RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 USH1GQ495M9 461 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 FAM78AQ5JUQ0 283 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 VITQ6UXI7 678 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 GLRX5Q86SX6 157 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 CAMKK1Q8N5S9 505 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 HDAC7Q8WUI4 952 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 RLN3Q8WXF3 142 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 FCRL2Q96LA5 508 aaPredicted RBP5.68□□□□□ -1.5
SDCBP-205ENST00000447267 IWS1Q96ST2 819 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 SPON2Q9BUD6 331 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 KRTAP4-11Q9BYQ6 195 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 BACH2Q9BYV9 841 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 CRTAC1Q9NQ79 661 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 ZNF215Q9UL58 517 aaPredicted RBP5.68□□□□□ -1.5
SDCBP-205ENST00000447267 MRPS23Q9Y3D9 190 aaKnown RBP5.68□□□□□ -1.5
SDCBP-205ENST00000447267 PCDHGB7Q9Y5F8 929 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 SPAG17Q6Q759 2223 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 OTOGQ6ZRI0 2925 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 ANO9A1A5B4 782 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 VPS37CA5D8V6 355 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-205ENST00000447267 BRINP1O60477 761 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 GJB3O75712 270 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 URODP06132 367 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 PNLIPP16233 465 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 HOXA5P20719 270 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 SMAD1Q15797 465 aaKnown RBP5.67□□□□□ -1.5
SDCBP-205ENST00000447267 SLC14A2Q15849 920 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 LINC00303Q3SY05 128 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 USP39Q53GS9 565 aaKnown RBP5.67□□□□□ -1.5
SDCBP-205ENST00000447267 BROXQ5VW32 411 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 C1QL3Q5VWW1 255 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 TDRD10Q5VZ19 366 aaKnown RBP5.67□□□□□ -1.5
SDCBP-205ENST00000447267 FAM228AQ86W67 206 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 CSGALNACT1Q8TDX6 532 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 UBE2Q2Q8WVN8 375 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 LPPQ93052 612 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 ZSWIM3Q96MP5 696 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 MKRN2Q9H000 416 aaKnown RBP5.67□□□□□ -1.5
SDCBP-205ENST00000447267 RXFP1Q9HBX9 757 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 CAPN10Q9HC96 672 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 ZFP14Q9HCL3 533 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 TRPV5Q9NQA5 729 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 AP5S1Q9NUS5 200 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 SUCOQ9UBS9 1254 aaKnown RBP5.67□□□□□ -1.5
SDCBP-205ENST00000447267 INPP5FQ9Y2H2 1132 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 KCTD3Q9Y597 815 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 FPGT-TNNI3KV9GXZ4 949 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 NCANO14594 1321 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 ZNF532Q9HCE3 1301 aa5.67□□□□□ -1.5
SDCBP-205ENST00000447267 PTPRBP23467 1997 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 MTORP42345 2549 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 MYBPHLA2RUH7 354 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 E9PAM4 449 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 ARNTLO00327 626 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 TRIM13O60858 407 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 DDHD2O94830 711 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 MSL3P1P0C860 447 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 RNF224P0DH78 156 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 INSRRP14616 1297 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 JUPP14923 745 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 VAV1P15498 845 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 PDE6AP16499 860 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 PSMC3P17980 439 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 PI3P19957 117 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 CDR1P51861 262 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 ERVFRD-1P60508 538 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 RACK1P63244 317 aaKnown RBP5.66□□□□□ -1.5
SDCBP-205ENST00000447267 SRSF3P84103 164 aaKnown RBP5.66□□□□□ -1.5
SDCBP-205ENST00000447267 SLC14A1Q13336 389 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 DUOXA1Q1HG43 343 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 SKIDA1Q1XH10 827 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 CCDC96Q2M329 555 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 PABPC1LQ4VXU2 614 aaKnown RBP5.66□□□□□ -1.5
SDCBP-205ENST00000447267 PPM1LQ5SGD2 360 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 SLC9C2Q5TAH2 1124 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 ERICH1Q86X53 443 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 ARID3BQ8IVW6 561 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-205ENST00000447267 SYNPOQ8N3V7 929 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 IL31RAQ8NI17 732 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 TCEAL4Q96EI5 215 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 FNBP1Q96RU3 617 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 JMJD8Q96S16 334 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 GAD1Q99259 594 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 PI4K2AQ9BTU6 479 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 C8orf33Q9H7E9 229 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-205ENST00000447267 TBC1D13Q9NVG8 400 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 SNTG2Q9NY99 539 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 KLHL14Q9P2G3 628 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 TNFRSF10DQ9UBN6 386 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 PILRBQ9UKJ0 227 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 ITGB1BP2Q9UKP3 347 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 CCDC171Q6TFL3 1326 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 FANCIQ9NVI1 1328 aa5.66□□□□□ -1.5
SDCBP-205ENST00000447267 DOCK6Q96HP0 2047 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 KIF26AQ9ULI4 1882 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-205ENST00000447267 SSU72P8A0A1W2PR75 194 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 WIPF3A6NGB9 483 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 F8W810 466 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 ATG13O75143 517 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms