RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 CUL1Q13616 776 aa10.47□□□□□ -0.73
PRPF38B-203ENST00000370025 CUL3Q13618 768 aa10.47□□□□□ -0.73
PRPF38B-203ENST00000370025 LONRF1Q17RB8 773 aa10.47□□□□□ -0.73
PRPF38B-203ENST00000370025 RASIP1Q5U651 963 aa10.47□□□□□ -0.73
PRPF38B-203ENST00000370025 SPATA21Q7Z572 469 aa10.47□□□□□ -0.73
PRPF38B-203ENST00000370025 RSPH3Q86UC2 560 aa10.47□□□□□ -0.73
PRPF38B-203ENST00000370025 SDCBP2Q9H190 292 aa10.47□□□□□ -0.73
PRPF38B-203ENST00000370025 LHX5Q9H2C1 402 aa10.47□□□□□ -0.73
PRPF38B-203ENST00000370025 HAO1Q9UJM8 370 aa10.47□□□□□ -0.73
PRPF38B-203ENST00000370025 TRIP11Q15643 1979 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 MYADML2A6NDP7 307 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 SUN1O94901 812 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 ACSL3O95573 720 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 PYGMP11217 842 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 SERPINB4P48594 390 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 PTPN11Q06124 597 aaPredicted RBP10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 RCN2Q14257 317 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 TRIP13Q15645 432 aaPredicted RBP10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 AGBL2Q5U5Z8 902 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 EMC10Q5UCC4 262 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 LLGL2Q6P1M3 1020 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 DNAJC24Q6P3W2 148 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 P3H4Q92791 437 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 APOL6Q9BWW8 343 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 TRIM7Q9C029 511 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 PCMTD2Q9NV79 361 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 IP6K2Q9UHH9 426 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 STRIP2Q9ULQ0 834 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 BARX2Q9UMQ3 279 aaPredicted RBP10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 USP15Q9Y4E8 981 aaPredicted RBP10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 SEPT4O43236 478 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 XPOTO43592 962 aaKnown RBP10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 SNX3O60493 162 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 RECQL4O94761 1208 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 PGK1P00558 417 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 UBTFL6P0CB48 400 aaPredicted RBP10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 ATF7P17544 494 aaPredicted RBP10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 HOXC8P31273 242 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 TAP1Q03518 808 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 DCUN1D2Q6PH85 259 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 CXCL17Q6UXB2 119 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 HOOK3Q86VS8 718 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 TMEM130Q8N3G9 435 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 SLC4A11Q8NBS3 891 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 FBXO25Q8TCJ0 367 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 TMEM40Q8WWA1 233 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 ATXN2LQ8WWM7 1075 aaKnown RBP10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 HEXIM2Q96MH2 286 aaKnown RBP10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 GORASP1Q9BQQ3 440 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 CNOT10Q9H9A5 744 aaKnown RBP10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 PARP2Q9UGN5 583 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 HES2Q9Y543 173 aa10.46□□□□□ -0.73
PRPF38B-203ENST00000370025 VDRP11473 427 aa10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 GBP1P32455 592 aa10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 PRKCZQ05513 592 aa10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 KLC1Q07866 573 aa10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 SLC5A9Q2M3M2 681 aa10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 AADACL2Q6P093 401 aa10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 ISLR2Q6UXK2 745 aa10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 CPNE8Q86YQ8 564 aa10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 MFN1Q8IWA4 741 aa10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 TSPAN18Q96SJ8 248 aa10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 UPF3AQ9H1J1 476 aaKnown RBP10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 NXF3Q9H4D5 531 aaKnown RBP10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 CTNNAL1Q9UBT7 734 aa10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 KIAA1257Q9ULG3 409 aa10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 UBQLN1Q9UMX0 589 aaKnown RBP10.46□□□□□ -0.74
PRPF38B-203ENST00000370025 RIPK1Q13546 671 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 FAM47CQ5HY64 1035 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 DENND1BQ6P3S1 775 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 PIGWQ7Z7B1 504 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 SLC13A5Q86YT5 568 aaPredicted RBP10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 RHOT1Q8IXI2 618 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 ELOVL4Q9GZR5 314 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 RAB17Q9H0T7 212 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 CNTN3Q9P232 1028 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 LNPEPQ9UIQ6 1025 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 CD4P01730 458 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 PMS2P54278 862 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 MTM1Q13496 603 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 ZBTB6Q15916 424 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 SGO2Q562F6 1265 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 WDTC1Q8N5D0 677 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 EIF1ADQ8N9N8 165 aaKnown RBP10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 KLHL23Q8NBE8 558 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 MAIP1Q8WWC4 291 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 ZMAT2Q96NC0 199 aaKnown RBP10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 NT5C1AQ9BXI3 368 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 SYNCQ9H7C4 482 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 CHCHD3Q9NX63 227 aaKnown RBP10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 GTF2IRD1Q9UHL9 959 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 USTQ9Y2C2 406 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 RALGAPA2Q2PPJ7 1873 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 SMAPO00193 183 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 PSTPIP1O43586 416 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 GSTA1P08263 222 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 AKAP5P24588 427 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 CHRNA3P32297 505 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 MAN1A1P33908 653 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms