RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 GLIS3Q8NEA6 775 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 TBC1D31Q96DN5 1066 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 TASP1Q9H6P5 420 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 NOP53Q9NZM5 478 aaKnown RBP7.76□□□□□ -1.17
ZNF540-202ENST00000343599 ARHGAP28Q9P2N2 729 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 ACSL6Q9UKU0 697 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 RBM8AQ9Y5S9 174 aaKnown RBP7.76□□□□□ -1.17
ZNF540-202ENST00000343599 ANO9A1A5B4 782 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 FAM92AA1XBS5 289 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 IKBKBO14920 756 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 HNRNPLP14866 589 aaKnown RBP eCLIP7.76□□□□□ -1.17
ZNF540-202ENST00000343599 SCTRP47872 440 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 ZNF131P52739 623 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 FANCCQ00597 558 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 LBRQ14739 615 aaKnown RBP7.76□□□□□ -1.17
ZNF540-202ENST00000343599 EMC2Q15006 297 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 NPY5RQ15761 445 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 SGSM1Q2NKQ1 1148 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 SYCP2LQ5T4T6 812 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 ARL6IP4Q66PJ3 421 aaKnown RBP7.76□□□□□ -1.17
ZNF540-202ENST00000343599 ZNF280DQ6N043 979 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 ELOA2Q8IYF1 753 aaPredicted RBP7.76□□□□□ -1.17
ZNF540-202ENST00000343599 TRIM22Q8IYM9 498 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 BLIDQ8IZY5 108 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 LRRC52Q8N7C0 313 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 MYCBPAPQ8TBZ2 947 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 CDC6Q99741 560 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 SEMA3CQ99985 751 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 CLSTN3Q9BQT9 956 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 SLC2A11Q9BYW1 496 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 OSBPL7Q9BZF2 842 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 ZCWPW1Q9H0M4 648 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 FOXP1Q9H334 677 aaPredicted RBP7.76□□□□□ -1.17
ZNF540-202ENST00000343599 SLC32A1Q9H598 525 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 GDAP2Q9NXN4 497 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 NCDNQ9UBB6 729 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 CKAP5Q14008 2032 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 CCDC195A0A1B0GUA6 201 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 HOXC11O43248 304 aaPredicted RBP7.75□□□□□ -1.17
ZNF540-202ENST00000343599 SSBP05455 408 aaKnown RBP eCLIP7.75□□□□□ -1.17
ZNF540-202ENST00000343599 AP3M2P53677 418 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 SEMA3BQ13214 749 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 ORC1Q13415 861 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 PRPF4BQ13523 1007 aaKnown RBP7.75□□□□□ -1.17
ZNF540-202ENST00000343599 PSMD5Q16401 504 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 FAM102BQ5T8I3 360 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 NEK8Q86SG6 692 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 SYCP3Q8IZU3 236 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 GBP7Q8N8V2 638 aaPredicted RBP7.75□□□□□ -1.17
ZNF540-202ENST00000343599 NOA1Q8NC60 698 aaKnown RBP7.75□□□□□ -1.17
ZNF540-202ENST00000343599 TEKT4Q8WW24 435 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 LZICQ8WZA0 190 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 FAM81BQ96LP2 452 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 PURBQ96QR8 312 aaKnown RBP7.75□□□□□ -1.17
ZNF540-202ENST00000343599 CCT8L2Q96SF2 557 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 MYL10Q9BUA6 226 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 DNAI2Q9GZS0 605 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 HSD3B7Q9H2F3 369 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 ZFP14Q9HCL3 533 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 ATXN10Q9UBB4 475 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 SMAPO00193 183 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 ATXN7O15265 892 aaPredicted RBP7.75□□□□□ -1.17
ZNF540-202ENST00000343599 DXOO77932 396 aaKnown RBP7.75□□□□□ -1.17
ZNF540-202ENST00000343599 DESP17661 470 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 RPS6KB1P23443 525 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 ZBTB16Q05516 673 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 PDCLQ13371 301 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 POSTNQ15063 836 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 PMS2CLQ68D20 193 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 FAM173BQ6P4H8 233 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 EEPD1Q7L9B9 569 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 KANSL1Q7Z3B3 1105 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 NLRP14Q86W24 1093 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 CPA6Q8N4T0 437 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 HELQQ8TDG4 1101 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 DHRS1Q96LJ7 313 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 ADPGKQ9BRR6 497 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 SELENOOQ9BVL4 669 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 MRPL44Q9H9J2 332 aaKnown RBP7.75□□□□□ -1.17
ZNF540-202ENST00000343599 ERVMER34-1Q9H9K5 563 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 TUBGCP4Q9UGJ1 667 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 FBXL21Q9UKT6 434 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 TMCO1Q9UM00 188 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 NOVA2Q9UNW9 492 aaKnown RBP7.75□□□□□ -1.17
ZNF540-202ENST00000343599 PTPRBP23467 1997 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 CTAGE9A4FU28 777 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 DPPA5A6NC42 116 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 ZNF217O75362 1048 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 THP07101 528 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 NCKAP1LP55160 1127 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 NLRP11P59045 1033 aaKnown RBP7.75□□□□□ -1.17
ZNF540-202ENST00000343599 ZNF394Q53GI3 561 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 ALS2CLQ60I27 953 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 FAM217AQ8IXS0 508 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 SIX5Q8N196 739 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 BCL7CQ8WUZ0 217 aaPredicted RBP7.75□□□□□ -1.17
ZNF540-202ENST00000343599 TAF4BQ92750 862 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 AZIN2Q96A70 460 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 JAKMIP2Q96AA8 810 aa7.75□□□□□ -1.17
ZNF540-202ENST00000343599 TRMT61BQ9BVS5 477 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms