RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Reep2Q8VCD6 254 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Efhc1Q9D9T8 648 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Hey2Q9QUS4 339 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Il2P04351 169 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Orm2P07361 207 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Klra9Q2TJJ8 266 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Acot5Q6Q2Z6 421 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Lars2Q8VDC0 902 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Rgs10Q9CQE5 181 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Pramef20B1ARV6 477 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Zc3h7aE9PWW6 970 aaKnown RBP17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Gm3248K7N721 186 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Gm10436L7N1Y3 520 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Adam7O35227 789 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Rin3P59729 980 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 RnaselQ05921 735 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Cul4aQ3TCH7 759 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Plekha7Q3UIL6 1118 aaKnown RBP17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Gm13103Q4VAD2 491 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Clca4aQ6Q473 924 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Fbxo10Q7TQF2 950 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Tyw1Q8BJM7 721 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Cops7bQ8BV13 264 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Epha10Q8BYG9 1007 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 TbccQ8VCN9 341 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Uchl3Q9JKB1 230 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Slc22a3Q9WTW5 551 aa17.3■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Ccdc163A2AGD7 326 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Gm6408J3QNG1 320 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Tuba3aP05214 450 aaKnown RBP17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Avpr1aQ62463 423 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 DaglaQ6WQJ1 1044 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Fbxo44Q8BK26 255 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Nemp2Q8CB65 421 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Plcl2Q8K394 1128 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Fam173bQ9D1Z3 247 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Cdyl2Q9D5D8 503 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Cdkl2Q9QUK0 568 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Gm3460E9QAI8 215 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 StamP70297 548 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Cdca2Q14B71 982 aaKnown RBP17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Spc25Q3UA16 226 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 ChfrQ810L3 664 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Pcdhgb4Q91XX6 912 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Rnf103Q9R1W3 683 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 L1camP11627 1260 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Rtkn2Q14B46 604 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Gm4951Q3UED7 406 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Lrrc47Q505F5 581 aaKnown RBP17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Tdrd5Q5VCS6 1040 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 FancbQ5XJY6 703 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Mindy1Q76LS9 468 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Mrps35Q8BJZ4 320 aaKnown RBP17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Serpina3bQ8BYY9 420 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 TwnkQ8CIW5 685 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Ndufaf1Q9CWX2 328 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Rex1bdQ9CYZ6 169 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Zfp655Q9CZP3 541 aaKnown RBP17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Cdc42ep4Q9JM96 349 aaKnown RBP17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Copg1Q9QZE5 874 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 PtenO08586 403 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 CstaP56567 97 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Lrrn4P59383 733 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Hmbox1Q8BJA3 419 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Rab36Q8CAM5 267 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 C8aQ8K182 587 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Caskin2Q8VHK1 1201 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Fbrsl1E9Q9T0 1031 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Inpp1P49442 396 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Ptprn2P80560 1001 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Senp7Q8BUH8 1037 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Arhgef19Q8BWA8 802 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Extl2Q9ES89 330 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Psma4Q9R1P0 261 aa17.29■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Olfr1123A2AT85 323 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 CblP22682 913 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Klhl17Q6TDP3 640 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Cnot3Q8K0V4 751 aaKnown RBP17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 OafQ8QZR4 282 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Ces4aQ8R0W5 563 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Med24Q99K74 987 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Nos1apQ9D3A8 503 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Tmem206Q9D771 350 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 ParvaQ9EPC1 372 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Gm44511A0A0N4SW10 223 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Nfkb1P25799 971 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Eps15l1Q60902 907 aaKnown RBP17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Mcm8Q9CWV1 833 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Rab27aQ9ERI2 221 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Mapk11Q9WUI1 364 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Kif20bQ80WE4 1774 aaKnown RBP17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Usp17lbE9Q9U0 468 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Gm2832F7AEC7 200 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Rfpl4bJ3QPR6 266 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Kcnma1Q08460 1209 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 HnrnpdQ60668 355 aaKnown RBP17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Sema3dQ8BH34 777 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Fam180aQ8BR21 173 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Atp6v1hQ8BVE3 483 aa17.28■□□□□ 0.36
Col17a1-201ENSMUST00000026045 Trpc4apQ9JLV2 797 aa17.28■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 57.2 ms