RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeastyeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB4YPR056W YJL144WP47009 104 aa4.03□□□□□ -1.76
TFB4YPR056W TOM6P33448 61 aa4.02□□□□□ -1.77
TFB4YPR056W YHR022CP38763 256 aa4.02□□□□□ -1.77
TFB4YPR056W RDS3Q06835 107 aaPredicted RBP4.02□□□□□ -1.77
TFB4YPR056W DOP1Q03921 1698 aa4.01□□□□□ -1.77
TFB4YPR056W HPA2Q06592 156 aa4.01□□□□□ -1.77
TFB4YPR056W SWM2P40342 146 aa4□□□□□ -1.77
TFB4YPR056W ICS3P47034 131 aa4□□□□□ -1.77
TFB4YPR056W MLP1Q02455 1875 aaKnown RBP4□□□□□ -1.77
TFB4YPR056W BPT1P14772 1559 aa3.99□□□□□ -1.77
TFB4YPR056W YBR027CP38220 110 aa3.99□□□□□ -1.77
TFB4YPR056W PAU5P43575 122 aa3.99□□□□□ -1.77
TFB4YPR056W IMP2P46972 177 aa3.99□□□□□ -1.77
TFB4YPR056W CYT2Q00873 224 aa3.99□□□□□ -1.77
TFB4YPR056W YDR119W-AQ2V2P9 66 aa3.99□□□□□ -1.77
TFB4YPR056W SRB8P25648 1427 aa3.98□□□□□ -1.77
TFB4YPR056W ROX3P25046 220 aa3.98□□□□□ -1.77
TFB4YPR056W POL1P13382 1468 aa3.97□□□□□ -1.77
TFB4YPR056W TY1B-JR2P47100 1755 aaKnown RBP3.97□□□□□ -1.77
TFB4YPR056W TY1B-ER2Q03619 1755 aa3.97□□□□□ -1.77
TFB4YPR056W TY1B-MR1Q04214 1755 aa3.97□□□□□ -1.77
TFB4YPR056W TY1B-MR2Q04670 1755 aaKnown RBP3.97□□□□□ -1.77
TFB4YPR056W TY1B-LR1Q12088 1755 aaKnown RBP3.97□□□□□ -1.77
TFB4YPR056W TY1B-NL1Q12112 1755 aa3.97□□□□□ -1.77
TFB4YPR056W TY1B-GR1Q12141 1755 aa3.97□□□□□ -1.77
TFB4YPR056W TY1B-BLQ12490 1755 aa3.97□□□□□ -1.77
TFB4YPR056W LAA1P39526 2014 aa3.96□□□□□ -1.78
TFB4YPR056W SSS1P35179 80 aa3.96□□□□□ -1.78
TFB4YPR056W POR2P40478 281 aa3.96□□□□□ -1.78
TFB4YPR056W YHR007C-AQ07074 71 aa3.96□□□□□ -1.78
TFB4YPR056W YOL118CQ08259 102 aa3.96□□□□□ -1.78
TFB4YPR056W FLO9P39712 1322 aa3.95□□□□□ -1.78
TFB4YPR056W MON2P48563 1636 aaPredicted RBP3.95□□□□□ -1.78
TFB4YPR056W RPS22AP0C0W1 130 aaKnown RBP3.95□□□□□ -1.78
TFB4YPR056W MHF2Q3E829 80 aa3.95□□□□□ -1.78
TFB4YPR056W HMRA2P0CY13 119 aa3.93□□□□□ -1.78
TFB4YPR056W XRN1P22147 1528 aaKnown RBP3.92□□□□□ -1.78
TFB4YPR056W IQG1Q12280 1495 aa3.92□□□□□ -1.78
TFB4YPR056W AGA2P32781 87 aa3.91□□□□□ -1.78
TFB4YPR056W ATX1P38636 73 aa3.91□□□□□ -1.78
TFB4YPR056W YMR321CQ04898 105 aa3.91□□□□□ -1.78
TFB4YPR056W YDR381C-AQ3E6R5 114 aa3.91□□□□□ -1.78
TFB4YPR056W ECM29P38737 1868 aa3.9□□□□□ -1.78
TFB4YPR056W RPL22AP05749 121 aaKnown RBP3.9□□□□□ -1.79
TFB4YPR056W PFY1P07274 126 aa3.9□□□□□ -1.79
TFB4YPR056W YGL014C-AP0C5N1 53 aa3.9□□□□□ -1.79
TFB4YPR056W MIC27P50945 234 aa3.9□□□□□ -1.79
TFB4YPR056W YOL131WQ08270 108 aa3.9□□□□□ -1.79
TFB4YPR056W NHP2P32495 156 aaPredicted RBP3.89□□□□□ -1.79
TFB4YPR056W YHL037CP38733 133 aa3.89□□□□□ -1.79
TFB4YPR056W LST8P41318 303 aa3.89□□□□□ -1.79
TFB4YPR056W RPS22BQ3E7Y3 130 aaKnown RBP3.89□□□□□ -1.79
TFB4YPR056W RRP5Q05022 1729 aaKnown RBP3.89□□□□□ -1.79
TFB4YPR056W MRP17P28778 131 aa3.88□□□□□ -1.79
TFB4YPR056W YBR292CP38357 123 aa3.88□□□□□ -1.79
TFB4YPR056W DSE2P38844 325 aa3.88□□□□□ -1.79
TFB4YPR056W MIX17Q03667 156 aa3.88□□□□□ -1.79
TFB4YPR056W LSM6Q06406 86 aaKnown RBP3.88□□□□□ -1.79
TFB4YPR056W YPR145C-AQ2V2P0 78 aa3.88□□□□□ -1.79
TFB4YPR056W YLR285C-AQ3E771 56 aa3.88□□□□□ -1.79
TFB4YPR056W YCR095W-AQ3E787 52 aa3.88□□□□□ -1.79
TFB4YPR056W HAP1P0CE41 1502 aa3.88□□□□□ -1.79
TFB4YPR056W PDR12Q02785 1511 aa3.88□□□□□ -1.79
TFB4YPR056W SED1Q01589 338 aa3.87□□□□□ -1.79
TFB4YPR056W YOR343CQ12484 108 aa3.87□□□□□ -1.79
TFB4YPR056W YCL048W-AQ2V2Q2 79 aa3.87□□□□□ -1.79
TFB4YPR056W DNF1P32660 1571 aa3.87□□□□□ -1.79
TFB4YPR056W YHR214C-DP0CX93 97 aa3.86□□□□□ -1.79
TFB4YPR056W TAR1Q8TGM6 124 aa3.86□□□□□ -1.79
TFB4YPR056W RPL33AP05744 107 aaKnown RBP3.84□□□□□ -1.79
TFB4YPR056W YMR122CQ03879 124 aa3.84□□□□□ -1.79
TFB4YPR056W PAU23Q07987 124 aa3.84□□□□□ -1.79
TFB4YPR056W PAU17Q12370 124 aa3.84□□□□□ -1.79
TFB4YPR056W YCF1P39109 1515 aaKnown RBP3.84□□□□□ -1.8
TFB4YPR056W MRPL38P35996 138 aaPredicted RBP3.83□□□□□ -1.8
TFB4YPR056W AIM4P38305 123 aaPredicted RBP3.83□□□□□ -1.8
TFB4YPR056W YPL038W-AQ3E7B4 63 aa3.83□□□□□ -1.8
TFB4YPR056W TY2B-LR1P0C2J3 1770 aa3.83□□□□□ -1.8
TFB4YPR056W TY2B-FP0CX63 1770 aa3.83□□□□□ -1.8
TFB4YPR056W TY2B-GR2P0CX64 1770 aa3.83□□□□□ -1.8
TFB4YPR056W TY2B-CP25384 1770 aa3.83□□□□□ -1.8
TFB4YPR056W TY2B-DR2Q03494 1770 aa3.83□□□□□ -1.8
TFB4YPR056W TY2B-DR3Q07791 1770 aaKnown RBP3.83□□□□□ -1.8
TFB4YPR056W TY2B-OR1Q12113 1770 aa3.83□□□□□ -1.8
TFB4YPR056W TY2B-DR1Q12472 1770 aa3.83□□□□□ -1.8
TFB4YPR056W TY2B-BQ12491 1770 aa3.83□□□□□ -1.8
TFB4YPR056W TY2B-OR2Q12501 1770 aa3.83□□□□□ -1.8
TFB4YPR056W SSK2P53599 1579 aa3.82□□□□□ -1.8
TFB4YPR056W MYO4P32492 1471 aa3.82□□□□□ -1.8
TFB4YPR056W YIL163CP40448 117 aa3.82□□□□□ -1.8
TFB4YPR056W SNA2P56508 79 aa3.82□□□□□ -1.8
TFB4YPR056W VAM10Q08474 114 aa3.82□□□□□ -1.8
TFB4YPR056W YFL041W-AQ3E817 63 aa3.82□□□□□ -1.8
TFB4YPR056W UFD4P33202 1483 aa3.81□□□□□ -1.8
TFB4YPR056W SPC1P46965 94 aa3.81□□□□□ -1.8
TFB4YPR056W YNL198CP40166 100 aa3.79□□□□□ -1.8
TFB4YPR056W VPS55P47111 140 aa3.79□□□□□ -1.8
TFB4YPR056W VPS15P22219 1454 aa3.79□□□□□ -1.8
TFB4YPR056W YBL071CP38185 102 aa3.78□□□□□ -1.8
TFB4YPR056W YEL008WP40001 126 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms