RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeastyeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP1YOL006C RPL36BO14455 100 aaKnown RBP2.29□□□□□ -2.04
TOP1YOL006C RPL36AP05745 100 aaPredicted RBP2.29□□□□□ -2.04
TOP1YOL006C RPA12P32529 125 aaKnown RBP2.29□□□□□ -2.04
TOP1YOL006C RPB7P34087 171 aa2.29□□□□□ -2.04
TOP1YOL006C YHL005CP38752 130 aa2.29□□□□□ -2.04
TOP1YOL006C YJL144WP47009 104 aa2.29□□□□□ -2.04
TOP1YOL006C RGM1Q00453 211 aa2.29□□□□□ -2.04
TOP1YOL006C YLR194CQ05777 254 aa2.29□□□□□ -2.04
TOP1YOL006C YMR175W-AQ3E766 64 aa2.29□□□□□ -2.04
TOP1YOL006C YLR419WQ06698 1435 aaKnown RBP2.29□□□□□ -2.04
TOP1YOL006C UFD4P33202 1483 aa2.29□□□□□ -2.04
TOP1YOL006C PAU16P35994 123 aa2.29□□□□□ -2.04
TOP1YOL006C SRX1P36077 127 aa2.29□□□□□ -2.04
TOP1YOL006C PAU15P40585 124 aa2.29□□□□□ -2.04
TOP1YOL006C AVO2Q04749 426 aa2.29□□□□□ -2.04
TOP1YOL006C ENV10Q99382 181 aa2.29□□□□□ -2.04
TOP1YOL006C MLP1Q02455 1875 aaKnown RBP2.28□□□□□ -2.04
TOP1YOL006C GCV3P39726 170 aaPredicted RBP2.28□□□□□ -2.04
TOP1YOL006C RSM18P40033 138 aa2.28□□□□□ -2.04
TOP1YOL006C RDS3Q06835 107 aaPredicted RBP2.28□□□□□ -2.04
TOP1YOL006C LAA1P39526 2014 aa2.28□□□□□ -2.04
TOP1YOL006C YRF1-1P0CX20 1796 aa2.28□□□□□ -2.04
TOP1YOL006C YRF1-5P0CX21 1796 aa2.28□□□□□ -2.04
TOP1YOL006C YRF1-8P0CX22 1796 aa2.28□□□□□ -2.04
TOP1YOL006C FPR1P20081 114 aaKnown RBP2.28□□□□□ -2.05
TOP1YOL006C YBR013CP38215 129 aa2.28□□□□□ -2.05
TOP1YOL006C COX23P38824 151 aa2.28□□□□□ -2.05
TOP1YOL006C HPA2Q06592 156 aa2.28□□□□□ -2.05
TOP1YOL006C QCR8P08525 94 aa2.27□□□□□ -2.05
TOP1YOL006C YHR022CP38763 256 aa2.27□□□□□ -2.05
TOP1YOL006C PAI3P01094 68 aa2.26□□□□□ -2.05
TOP1YOL006C CYT2Q00873 224 aa2.26□□□□□ -2.05
TOP1YOL006C ICY1Q04329 127 aa2.26□□□□□ -2.05
TOP1YOL006C MHF1Q3E835 90 aa2.26□□□□□ -2.05
TOP1YOL006C YHR007C-AQ07074 71 aa2.25□□□□□ -2.05
TOP1YOL006C PRM3Q08931 133 aa2.25□□□□□ -2.05
TOP1YOL006C MMS22Q06164 1454 aa2.25□□□□□ -2.05
TOP1YOL006C CHC1P22137 1653 aaKnown RBP2.25□□□□□ -2.05
TOP1YOL006C PAU5P43575 122 aa2.25□□□□□ -2.05
TOP1YOL006C AGA2P32781 87 aa2.24□□□□□ -2.05
TOP1YOL006C TOM6P33448 61 aa2.24□□□□□ -2.05
TOP1YOL006C YBR027CP38220 110 aa2.24□□□□□ -2.05
TOP1YOL006C IMP2P46972 177 aa2.24□□□□□ -2.05
TOP1YOL006C ICS3P47034 131 aa2.24□□□□□ -2.05
TOP1YOL006C SML1Q04964 104 aa2.24□□□□□ -2.05
TOP1YOL006C ARO1P08566 1588 aaKnown RBP2.24□□□□□ -2.05
TOP1YOL006C YFR010W-AP0C5N0 62 aa2.24□□□□□ -2.05
TOP1YOL006C BCK1Q01389 1478 aa2.24□□□□□ -2.05
TOP1YOL006C SMC4Q12267 1418 aa2.24□□□□□ -2.05
TOP1YOL006C ROX3P25046 220 aa2.23□□□□□ -2.05
TOP1YOL006C POR2P40478 281 aa2.23□□□□□ -2.05
TOP1YOL006C TY1B-JR2P47100 1755 aaKnown RBP2.23□□□□□ -2.05
TOP1YOL006C TY1B-ER2Q03619 1755 aa2.23□□□□□ -2.05
TOP1YOL006C TY1B-MR1Q04214 1755 aa2.23□□□□□ -2.05
TOP1YOL006C TY1B-MR2Q04670 1755 aaKnown RBP2.23□□□□□ -2.05
TOP1YOL006C TY1B-LR1Q12088 1755 aaKnown RBP2.23□□□□□ -2.05
TOP1YOL006C TY1B-NL1Q12112 1755 aa2.23□□□□□ -2.05
TOP1YOL006C TY1B-GR1Q12141 1755 aa2.23□□□□□ -2.05
TOP1YOL006C TY1B-BLQ12490 1755 aa2.23□□□□□ -2.05
TOP1YOL006C POL1P13382 1468 aa2.22□□□□□ -2.05
TOP1YOL006C RPS22AP0C0W1 130 aaKnown RBP2.22□□□□□ -2.05
TOP1YOL006C MYO4P32492 1471 aa2.22□□□□□ -2.05
TOP1YOL006C HMRA2P0CY13 119 aa2.22□□□□□ -2.05
TOP1YOL006C DSE2P38844 325 aa2.22□□□□□ -2.05
TOP1YOL006C YOL118CQ08259 102 aa2.22□□□□□ -2.05
TOP1YOL006C MHF2Q3E829 80 aa2.22□□□□□ -2.05
TOP1YOL006C ECM29P38737 1868 aa2.21□□□□□ -2.06
TOP1YOL006C FLO9P39712 1322 aa2.21□□□□□ -2.06
TOP1YOL006C YGL014C-AP0C5N1 53 aa2.21□□□□□ -2.06
TOP1YOL006C SWM2P40342 146 aa2.21□□□□□ -2.06
TOP1YOL006C YDR119W-AQ2V2P9 66 aa2.21□□□□□ -2.06
TOP1YOL006C SPO14P36126 1683 aa2.21□□□□□ -2.06
TOP1YOL006C SRB8P25648 1427 aa2.21□□□□□ -2.06
TOP1YOL006C YMR321CQ04898 105 aa2.2□□□□□ -2.06
TOP1YOL006C ULS1Q08562 1619 aa2.2□□□□□ -2.06
TOP1YOL006C CDC39P25655 2108 aaKnown RBP2.2□□□□□ -2.06
TOP1YOL006C PFY1P07274 126 aa2.2□□□□□ -2.06
TOP1YOL006C RRP5Q05022 1729 aaKnown RBP2.2□□□□□ -2.06
TOP1YOL006C SSS1P35179 80 aa2.19□□□□□ -2.06
TOP1YOL006C LST8P41318 303 aa2.19□□□□□ -2.06
TOP1YOL006C XRN1P22147 1528 aaKnown RBP2.19□□□□□ -2.06
TOP1YOL006C SED1Q01589 338 aa2.19□□□□□ -2.06
TOP1YOL006C LSM6Q06406 86 aaKnown RBP2.19□□□□□ -2.06
TOP1YOL006C YLR285C-AQ3E771 56 aa2.19□□□□□ -2.06
TOP1YOL006C RPS22BQ3E7Y3 130 aaKnown RBP2.19□□□□□ -2.06
TOP1YOL006C TY3B-GQ99315 1547 aa2.19□□□□□ -2.06
TOP1YOL006C RPL33AP05744 107 aaKnown RBP2.18□□□□□ -2.06
TOP1YOL006C RPL22AP05749 121 aaKnown RBP2.18□□□□□ -2.06
TOP1YOL006C NHP2P32495 156 aaPredicted RBP2.18□□□□□ -2.06
TOP1YOL006C YHL037CP38733 133 aa2.18□□□□□ -2.06
TOP1YOL006C YDR381C-AQ3E6R5 114 aa2.18□□□□□ -2.06
TOP1YOL006C YCR095W-AQ3E787 52 aa2.18□□□□□ -2.06
TOP1YOL006C TAR1Q8TGM6 124 aa2.18□□□□□ -2.06
TOP1YOL006C USO1P25386 1790 aa2.18□□□□□ -2.06
TOP1YOL006C MRP17P28778 131 aa2.18□□□□□ -2.06
TOP1YOL006C MIC27P50945 234 aa2.18□□□□□ -2.06
TOP1YOL006C YCL048W-AQ2V2Q2 79 aa2.18□□□□□ -2.06
TOP1YOL006C ATX1P38636 73 aa2.17□□□□□ -2.06
TOP1YOL006C YPR145C-AQ2V2P0 78 aa2.17□□□□□ -2.06
TOP1YOL006C IQG1Q12280 1495 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms